forked from horovod/horovod
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Dockerfile.test.cpu
200 lines (174 loc) · 9.51 KB
/
Dockerfile.test.cpu
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
ARG UBUNTU_VERSION=16.04
FROM ubuntu:${UBUNTU_VERSION}
# Arguments for the build. UBUNTU_VERSION needs to be repeated because
# the first usage only applies to the FROM tag.
ARG UBUNTU_VERSION=16.04
ARG MPI_KIND=OpenMPI
ARG PYTHON_VERSION=3.6
ARG TENSORFLOW_PACKAGE=tensorflow==1.14.0
ARG KERAS_PACKAGE=keras==2.2.4
ARG PYTORCH_PACKAGE=torch==1.2.0+cpu
ARG TORCHVISION_PACKAGE=torchvision==0.4.0+cpu
ARG MXNET_PACKAGE=mxnet==1.5.0
ARG PYSPARK_PACKAGE=pyspark==2.4.0
# Set default shell to /bin/bash
SHELL ["/bin/bash", "-cu"]
# Install essential packages.
RUN apt-get update -qq && apt-get install -y --no-install-recommends \
wget \
ca-certificates \
cmake \
openssh-client \
git \
build-essential \
g++-4.8
# install g++-7
RUN apt-get install -y --no-install-recommends software-properties-common
RUN add-apt-repository ppa:ubuntu-toolchain-r/test
RUN apt-get update -qq && apt-get install -y --no-install-recommends g++-7
# Install Python.
RUN apt-get install -y python${PYTHON_VERSION} python${PYTHON_VERSION}-dev python${PYTHON_VERSION}-distutils
RUN ln -s -f /usr/bin/python${PYTHON_VERSION} /usr/bin/python
RUN wget https://bootstrap.pypa.io/get-pip.py && python get-pip.py && rm get-pip.py
RUN pip install -U --force pip 'setuptools<46.0.0' requests pytest mock pytest-forked
# Install PySpark.
RUN apt-get update -qq && apt install -y openjdk-8-jdk-headless
RUN pip install ${PYSPARK_PACKAGE}
# Install MPI.
RUN if [[ ${MPI_KIND} == "OpenMPI" ]]; then \
wget -O /tmp/openmpi-3.0.0-bin.tar.gz https://github.com/horovod/horovod/files/1596799/openmpi-3.0.0-bin.tar.gz && \
cd /usr/local && tar -zxf /tmp/openmpi-3.0.0-bin.tar.gz && ldconfig && \
echo "mpirun -allow-run-as-root -np 2 -H localhost:2 -bind-to none -map-by slot -mca mpi_abort_print_stack 1" > /mpirun_command; \
elif [[ ${MPI_KIND} == "ONECCL" ]]; then \
wget -O /tmp/oneccl.tar.gz https://github.com/oneapi-src/oneCCL/archive/master.tar.gz && \
cd /tmp && tar -zxf oneccl.tar.gz && \
mkdir oneCCL-master/build && cd oneCCL-master/build && cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local/oneccl -DCMAKE_BUILD_TYPE=Release && make -j install && \
cp /tmp/oneCCL-master/mpi/include/*.h /usr/local/oneccl/include && \
cp /tmp/oneCCL-master/mpi/bin/mpicc /usr/local/oneccl/bin && \
chmod +x /usr/local/oneccl/bin/mpicc && \
cp /tmp/oneCCL-master/mpi/bin/mpicxx /usr/local/oneccl/bin && \
chmod +x /usr/local/oneccl/bin/mpicxx && \
cp /tmp/oneCCL-master/mpi/bin/mpigcc /usr/local/oneccl/bin && \
chmod +x /usr/local/oneccl/bin/mpigcc && \
cp /tmp/oneCCL-master/mpi/bin/mpigxx /usr/local/oneccl/bin && \
chmod +x /usr/local/oneccl/bin/mpigxx && \
cp /tmp/oneCCL-master/mpi/lib/libmpicxx.so /usr/local/oneccl/lib && \
chmod +x /usr/local/oneccl/lib/libmpicxx.so && \
sed -i 's/if \[ -z \"\${I_MPI_ROOT}\" \]/if [ -z \"${I_MPI_ROOT:-}\" ]/g' /usr/local/oneccl/env/setvars.sh && \
sed -i 's/ \$1/ \${1:-}/g' /usr/local/oneccl/env/setvars.sh && \
echo ". /usr/local/oneccl/env/setvars.sh" > /oneccl_env && \
chmod +x /oneccl_env && \
echo "export CCL_ATL_TRANSPORT=ofi; export CCL_ATL_SHM=0; \
echo \"\$(env)\"; \
echo \"mpirun is \$(which mpirun)\"; \
echo \"LD_LIBRARY_PATH is \$(echo \$LD_LIBRARY_PATH)\"; \
echo \"oneCCL links with \$(ldd /usr/local/oneccl/lib/libccl.so)\"; \
mpirun -np 2 -hosts localhost \$@" > /mpirun_command_ofi && \
chmod +x /mpirun_command_ofi && \
cp /mpirun_command_ofi /mpirun_command_mpi && \
sed -i 's/export CCL_ATL_TRANSPORT=ofi;//g' /mpirun_command_mpi && \
sed -i 's/export CCL_ATL_SHM=0;//g' /mpirun_command_mpi && \
echo "-L/usr/local/oneccl/lib -lmpi -I/usr/local/oneccl/include" > /mpicc_oneccl && \
chmod +x /mpicc_oneccl && \
echo "/mpirun_command_mpi" > /mpirun_command; \
elif [[ ${MPI_KIND} == "MPICH" ]]; then \
apt-get install -y mpich && \
echo "mpirun -np 2" > /mpirun_command; \
fi
# Install mpi4py.
RUN if [[ ${MPI_KIND} != "None" ]]; then \
if [[ ${MPI_KIND} == "ONECCL" ]]; then \
export I_MPI_ROOT=/usr/local/oneccl; \
export MPICC=/usr/local/oneccl/bin/mpicc; \
fi; \
pip install mpi4py; \
fi
### END OF CACHE ###
COPY . /horovod
# Install TensorFlow.
RUN pip install ${TENSORFLOW_PACKAGE}
# Install Keras.
# Pin scipy<1.4.0: https://github.com/scipy/scipy/issues/11237
RUN pip install ${KERAS_PACKAGE} h5py "scipy<1.4.0" pandas
RUN mkdir -p ~/.keras
RUN python -c "from keras.datasets import mnist; mnist.load_data()"
# Install PyTorch.
RUN pip install future typing
RUN if [[ ${PYTORCH_PACKAGE} == "torch-nightly" ]]; then \
pip install --pre torch ${TORCHVISION_PACKAGE} -v -f https://download.pytorch.org/whl/nightly/cpu/torch_nightly.html; \
else \
pip install ${PYTORCH_PACKAGE} ${TORCHVISION_PACKAGE} -f https://download.pytorch.org/whl/torch_stable.html; \
fi
# Pin Pillow<7.0: https://github.com/pytorch/vision/issues/1718
RUN pip install "Pillow<7.0" --no-deps
# Install MXNet.
RUN if [[ ${MXNET_PACKAGE} == "mxnet-nightly" ]]; then \
pip install --pre mxnet-mkl -f https://dist.mxnet.io/python/all; \
else \
pip install ${MXNET_PACKAGE} ; \
fi
# Install Horovod.
RUN if [[ ${MPI_KIND} == "ONECCL" ]]; then \
if [ -z "${LD_LIBRARY_PATH:-}" ]; then \
export LD_LIBRARY_PATH=""; \
fi; \
if [ -z "${PYTHONPATH:-}" ]; then \
export PYTHONPATH=""; \
fi; \
. /usr/local/oneccl/env/setvars.sh; \
export I_MPI_ROOT=/usr/local/oneccl; \
export PIP_HOROVOD_MPICXX_SHOW=/usr/local/oneccl/bin/mpicxx; \
echo "horovod python setup.py sdist, mpicxx is $(which mpicxx)"; \
cd /horovod && HOROVOD_WITH_TENSORFLOW=1 HOROVOD_WITH_PYTORCH=1 HOROVOD_WITH_MXNET=1 python setup.py sdist; \
else \
cd /horovod && HOROVOD_WITH_TENSORFLOW=1 HOROVOD_WITH_PYTORCH=1 HOROVOD_WITH_MXNET=1 python setup.py sdist; \
fi
RUN if [[ ${MPI_KIND} == "ONECCL" ]]; then \
if [ -z "${LD_LIBRARY_PATH:-}" ]; then \
export LD_LIBRARY_PATH=""; \
fi; \
if [ -z "${PYTHONPATH:-}" ]; then \
export PYTHONPATH=""; \
fi; \
. /usr/local/oneccl/env/setvars.sh; \
echo "pip install horovod, mpicxx is $(which mpicxx)"; \
pip install -v $(ls /horovod/dist/horovod-*.tar.gz)[spark]; \
else \
pip install -v $(ls /horovod/dist/horovod-*.tar.gz)[spark]; \
fi
# Prefetch Spark MNIST dataset.
RUN mkdir -p /work
RUN mkdir -p /data && wget https://www.csie.ntu.edu.tw/~cjlin/libsvmtools/datasets/multiclass/mnist.bz2 -O /data/mnist.bz2
# Hack for compatibility of MNIST example with TensorFlow 1.1.0.
RUN if [[ ${TENSORFLOW_PACKAGE} == "tensorflow==1.1.0" ]]; then \
sed -i "s/from tensorflow import keras/from tensorflow.contrib import keras/" /horovod/examples/tensorflow_mnist.py; \
fi
# Hack TensorFlow MNIST example to be smaller.
RUN sed -i "s/last_step=20000/last_step=100/" /horovod/examples/tensorflow_mnist.py
# Hack TensorFlow Eager MNIST example to be smaller.
RUN sed -i "s/dataset.take(20000/dataset.take(100/" /horovod/examples/tensorflow_mnist_eager.py
# Hack TensorFlow 2.0 example to be smaller.
RUN sed -i "s/dataset.take(10000/dataset.take(100/" /horovod/examples/tensorflow2_mnist.py
# Hack Keras MNIST advanced example to be smaller.
RUN sed -i "s/'--epochs', type=int, default=24,/'--epochs', type=int, default=9,/" /horovod/examples/keras_mnist_advanced.py
RUN sed -i "s/model.add(Conv2D(32, kernel_size=(3, 3),/model.add(Conv2D(1, kernel_size=(3, 3),/" /horovod/examples/keras_mnist_advanced.py
RUN sed -i "s/model.add(Conv2D(64, (3, 3), activation='relu'))//" /horovod/examples/keras_mnist_advanced.py
# Hack TensorFlow 2.0 Keras MNIST advanced example to be smaller.
RUN sed -i "s/epochs = .*/epochs = 9/" /horovod/examples/tensorflow2_keras_mnist.py
RUN sed -i "s/tf.keras.layers.Conv2D(32, \\[3, 3\\],/tf.keras.layers.Conv2D(1, [3, 3],/" /horovod/examples/tensorflow2_keras_mnist.py
RUN sed -i "s/tf.keras.layers.Conv2D(64, \\[3, 3\\], activation='relu')),//" /horovod/examples/tensorflow2_keras_mnist.py
# Hack PyTorch MNIST example to be smaller.
RUN sed -i "s/'--epochs', type=int, default=10,/'--epochs', type=int, default=2,/" /horovod/examples/pytorch_mnist.py
RUN sed -i "s/self.fc1 = nn.Linear(320, 50)/self.fc1 = nn.Linear(784, 50)/" /horovod/examples/pytorch_mnist.py
RUN sed -i "s/x = F.relu(F.max_pool2d(self.conv1(x), 2))//" /horovod/examples/pytorch_mnist.py
RUN sed -i "s/x = F.relu(F.max_pool2d(self.conv2_drop(self.conv2(x)), 2))//" /horovod/examples/pytorch_mnist.py
RUN sed -i "s/x = x.view(-1, 320)/x = x.view(-1, 784)/" /horovod/examples/pytorch_mnist.py
# Prefetch Spark Rossmann dataset.
RUN mkdir -p /work
RUN mkdir -p /data && wget http://files.fast.ai/part2/lesson14/rossmann.tgz -O - | tar -xzC /data
# Hack Keras Spark Rossmann Run example to be smaller.
RUN sed -i "s/x = Dense(1000,/x = Dense(100,/g" /horovod/examples/keras_spark_rossmann_run.py
RUN sed -i "s/x = Dense(500,/x = Dense(50,/g" /horovod/examples/keras_spark_rossmann_run.py
# Hack Keras Spark Rossmann Estimator example to be smaller.
RUN sed -i "s/x = Dense(1000,/x = Dense(100,/g" /horovod/examples/keras_spark_rossmann_estimator.py
RUN sed -i "s/x = Dense(500,/x = Dense(50,/g" /horovod/examples/keras_spark_rossmann_estimator.py