From 78121887653113cea603785b1d427ee4d74f4b08 Mon Sep 17 00:00:00 2001 From: gvegayon Date: Wed, 6 Sep 2023 21:34:17 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20UofUEpiB?= =?UTF-8?q?io/defm@8c2962828c5a9017c0e923647bd9fbc9a23764b2=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- apple-touch-icon-120x120.png | Bin 13750 -> 13750 bytes apple-touch-icon-152x152.png | Bin 17841 -> 17841 bytes apple-touch-icon-180x180.png | Bin 21097 -> 21097 bytes apple-touch-icon-60x60.png | Bin 5451 -> 5451 bytes apple-touch-icon-76x76.png | Bin 7716 -> 7716 bytes apple-touch-icon.png | Bin 21097 -> 21097 bytes favicon-16x16.png | Bin 1311 -> 1311 bytes favicon-32x32.png | Bin 2546 -> 2546 bytes index.html | 94 ++++++++++++------------- pkgdown.yml | 2 +- reference/figures/README-logodds-1.png | Bin 14451 -> 14630 bytes 11 files changed, 48 insertions(+), 48 deletions(-) diff --git a/apple-touch-icon-120x120.png b/apple-touch-icon-120x120.png index 188342031451d6688666fdf11abc8504cbba20f6..7b1f50794f9cc06f1af97271773bd492f31d8b53 100644 GIT binary patch delta 57 zcmdm%y)An}4V$9bHnrGm8=G29_>GONOii>646FSp@PMSy&mFXd4(<85mT`|M)TaWS|nV7>ARC%j92y F`2a`!6662? diff --git a/apple-touch-icon-60x60.png b/apple-touch-icon-60x60.png index 29eb6d5e79592a49c548e89748caedda3255e6a7..af83ddbb61a158007610eb460e24b23bab0fe03e 100644 GIT binary patch delta 57 zcmX@Dby{me4V$9zF`t!@8=Is=_>GONObxXS46FC;Aj106546F-lHzj=XR@r<2 DF02yb diff --git a/apple-touch-icon.png b/apple-touch-icon.png index 502921e333dfab7f18bc02ca22d2d4ed6a80830d..07cec3aeb3190c6ceeb8c2baff40f9aa3d736962 100644 GIT binary patch delta 59 zcmaF4gz@DP#tAiSidOq42>#vJWD&@3Y;0v}p>1GbWnj=NvVYO!lYvUeVt+i@30Z7`ZPKgB&7AoF DHa`-; delta 57 zcmew){7HC14V#S8F_D9!8=DSt@EciJ8JlPu7+4t?Y~A`JZE_H&60+El7Y?^3H*@9# E06`}cu>b%7 diff --git a/index.html b/index.html index 99f889c..3754839 100644 --- a/index.html +++ b/index.html @@ -269,11 +269,11 @@

Example 1: Four outcomeshead(cbind(id, simulated_Y)) #> id #> [1,] 1 0 0 0 -#> [2,] 1 0 0 0 +#> [2,] 1 0 0 1 #> [3,] 1 0 0 0 -#> [4,] 1 0 1 1 +#> [4,] 1 1 1 1 #> [5,] 2 0 1 0 -#> [6,] 2 0 1 0 +#> [6,] 2 1 1 0

Now, let’s see if we can recover the parameters using MLE:

+#> -2 log L: 54960.47

Or better, we can use texreg to generate a pretty output:

@@ -321,15 +321,15 @@

Example 1: Four outcomes

@@ -337,7 +337,7 @@

Example 1: Four outcomes

@@ -345,7 +345,7 @@

Example 1: Four outcomes

@@ -392,11 +392,11 @@

Example 1: Four outcomes1

- + - - + + @@ -412,13 +412,13 @@

Example 1: Four outcomes

- + - - + + @@ -434,47 +434,47 @@

Example 1: Four outcomes

- + - - + + - - + + + + - - - - + + - - - + + + - + - - - + + + @@ -588,17 +588,17 @@

Example 3: Using formulas for #> Support size : 19 #> Support size range : [11, 20] #> Transform. Fun. : no -#> Model terms (11) : -#> - Motif $(y0^+, y1^-) -> (y0^-, y1^+)$ -#> - Motif $(y1^+, y2^-) -> (y1^-, y2^+)$ -#> - Motif $(y2^+, y3^-) -> (y2^-, y3^+)$ -#> - Motif $(y3^+, y4^-) -> (y3^-, y4^+)$ -#> - Motif $(y4^+, y5^-) -> (y4^-, y5^+)$ -#> - Motif $(y5^+, y6^-) -> (y5^-, y6^+)$ -#> - Motif $(y6^+, y7^-) -> (y6^-, y7^+)$ -#> - Motif $(y7^+, y8^-) -> (y7^-, y8^+)$ -#> - Motif $(y8^+, y9^-) -> (y8^-, y9^+)$ -#> - Motif $(y0^-, y9^+) -> (y0^+, y9^-)$ +#> Model terms (11) : +#> - Motif {y0⁺, y1⁻} ⇨ {y0⁻, y1⁺} +#> - Motif {y1⁺, y2⁻} ⇨ {y1⁻, y2⁺} +#> - Motif {y2⁺, y3⁻} ⇨ {y2⁻, y3⁺} +#> - Motif {y3⁺, y4⁻} ⇨ {y3⁻, y4⁺} +#> - Motif {y4⁺, y5⁻} ⇨ {y4⁻, y5⁺} +#> - Motif {y5⁺, y6⁻} ⇨ {y5⁻, y6⁺} +#> - Motif {y6⁺, y7⁻} ⇨ {y6⁻, y7⁺} +#> - Motif {y7⁺, y8⁻} ⇨ {y7⁻, y8⁺} +#> - Motif {y8⁺, y9⁻} ⇨ {y8⁻, y9⁺} +#> - Motif {y0⁻, y9⁺} ⇨ {y0⁺, y9⁻} #> - Num. of ones #> Model rules (1) : #> - Markov model of order 1 diff --git a/pkgdown.yml b/pkgdown.yml index 665ef61..c18bf01 100644 --- a/pkgdown.yml 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@@ -313,7 +313,7 @@

Example 1: Four outcomes

--1.97 (0.01) +-2.01 (0.01)***
-1.96 (0.02) +2.02 (0.02)***
-Motif (y0^+) -> (y0^+, y1^+) +Motif {y0⁺} ⇨ {y0⁺, y1⁺} -4.91 (0.05) +5.05 (0.05)***
-56160.07 +54966.47
-56184.76 +54991.16
0 001 0.16 0.2500.0010.25 0
101 1 1 -0.20 1.5523.1134.66 0
201 1 0 1.19 0.9210.9221.84 0
2 10011 -0.65 1.1633.48 11.160
20011 0 -0.99 0.2100.00020.431
2 1 101 0.76 1.4522.90034.351
2