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Use patch_size instead of chunk_size as base shape for sampling #4

Merged
merged 9 commits into from
May 7, 2024
Merged

Use patch_size instead of chunk_size as base shape for sampling #4

merged 9 commits into from
May 7, 2024

Commits on Mar 29, 2024

  1. Changed PatchSampler to take as base the patche size instead of the i… 

    …nput image's chunk sizes
    @fercer
    fercer committed Mar 29, 2024
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  2. Reverted change in the computation when masks elements are relative s… 

    …maller than patch sizes
    @fercer
    fercer committed Mar 29, 2024
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Commits on Apr 5, 2024

  1. Fixed spatial chunk size computation when patch sizes are grater than… 

    … the chunk size
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    fercer committed Apr 5, 2024
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Commits on Apr 30, 2024

  1. Fixed missing patches from chunks smaller than the input image chunk … 

    …size
    @fercer
    fercer committed Apr 30, 2024
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Commits on May 1, 2024

  1. Padding and stride added to PatchSampler and ImageBase classes to all… 

    …ow overlapping patches extraction
    @fercer
    fercer committed May 1, 2024
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Commits on May 2, 2024

  1. Added tests for stride and pad parameters of PatchSampler class

    @fercer
    fercer committed May 2, 2024
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  2. Fixed patch slices generation in PatchSampler to always retrieve patc… 

    …hes of the defined shape
    @fercer
    fercer committed May 2, 2024
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Commits on May 7, 2024

  1. Standardized patch sampling method to handle smaller and bigger mask … 

    …scales than image scale
    @fercer
    fercer committed May 7, 2024
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  2. Added example notebook to documentation

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    fercer committed May 7, 2024
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