Fixed incorrect sampling of patches on masked regions #38

	name: Run Tests on push
	on: [push, pull_request, workflow_dispatch]

	jobs:
	test:
	runs-on: ubuntu-latest
	steps:
	- name: Checkout
	uses: actions/checkout@v2
	- name: Set up Python 3.9
	uses: actions/setup-python@v2
	with:
	python-version: 3.9

	- name: Install ependencies
	run: \|
	python -m pip install --upgrade pip
	pip install torch==1.13.1+cpu torchvision==0.14.1+cpu --extra-index-url https://download.pytorch.org/whl/cpu
	pip install tqdm==4.66.1
	pip install tifffile==2023.9.26
	pip install .

	- name: Test with pytest
	run: \|
	pip install pytest pytest-cov
	# When using pytest and pytorch at the same time, an error of multiple copied of OpenMP runtime library will rise.
	# This is a well known issue and is the reason of why pytorch uses unitest for testing and not pytest.
	# This is a non-recomended, non-supported, and therefore non-elegant solution for that problem, but at least let run the test suite.
	export KMP_DUPLICATE_LIB_OK=TRUE
	pytest tests --cov=zarrdataset
	coverage report -m

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