diff --git a/examples/elabftw/README.md b/examples/elabftw/README.md index 8d80d05..7a1f859 100644 --- a/examples/elabftw/README.md +++ b/examples/elabftw/README.md @@ -5,6 +5,8 @@ * Repo: https://github.com/elabftw/elabftw * Chat: https://gitter.im/elabftw/elabftw +You can generate .eln files from the demo: https://demo.elabftw.net. Select a few entries and export as .eln from the top menu. Or go to the Import section and do a full export. + ## Concepts used Here is a correspondance between concepts in eLabFTW and how they are translated in the metadata json file in the archive: @@ -44,12 +46,21 @@ Here is a correspondance between concepts in eLabFTW and how they are translated "conformsTo": { "@id": "https://w3id.org/ro/crate/1.1" }, - "dateCreated": "2024-06-19T12:04:50+02:00", + "dateCreated": "2024-11-17T15:10:44+01:00", "sdPublisher": { "@id": "#publisher" }, "version": "1.0" }, + { + "@id": "https://www.deltablot.com", + "@type": "Organization", + "areaServed": "Laniakea Supercluster", + "name": "Deltablot", + "logo": "https://www.deltablot.com/img/logos/deltablot.svg", + "slogan": "Open Source software for research labs.", + "url": "https://www.deltablot.com" + }, { "@id": "#publisher", "@type": "Organization", @@ -59,11 +70,7 @@ Here is a correspondance between concepts in eLabFTW and how they are translated "slogan": "A free and open source electronic lab notebook.", "url": "https://www.elabftw.net", "parentOrganization": { - "@type": "Organization", - "name": "Deltablot", - "logo": "https://www.deltablot.com/img/logos/deltablot.svg", - "slogan": "Open Source software for research labs.", - "url": "https://www.deltablot.com" + "@id": "https://www.deltablot.com" } }, { @@ -73,7 +80,7 @@ Here is a correspondance between concepts in eLabFTW and how they are translated "@id": "./" }, "name": "RO-Crate created", - "endTime": "2024-06-19T12:04:50+02:00", + "endTime": "2024-11-17T15:10:44+01:00", "instrument": { "@id": "https://www.elabftw.net" }, @@ -85,944 +92,781 @@ Here is a correspondance between concepts in eLabFTW and how they are translated "@id": "https://www.elabftw.net", "@type": "SoftwareApplication", "name": "eLabFTW", - "version": "5.1.0", + "version": "5.1.11", "identifier": "https://www.elabftw.net" }, { - "@id": "./RD - Testing-relationship-between-acceleration-and-gravity - 5adb0eb3/example.pptx", + "@id": "comment://4fb80877aeb18492a13ff6ae43049f5730b7846e97a9b99d70397f5ddaf5945d?hash_algo=sha256", + "@type": "Comment", + "dateCreated": "2024-11-17T03:02:01+01:00", + "text": "Well, it's always reassuring to know that scientists are spending their time and our tax dollars discovering what the rest of us already learned in third-grade science class.", + "author": { + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" + } + }, + { + "@id": "./Project-CRYPTO-COOL - 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\nThe acceleration due to gravity is a fundamental constant that determines the gravitational force between two objects. In this experiment, we aimed to determine the value of acceleration due to gravity using a simple pendulum.\n
\n\nWe suspended a metal ball from a string and measured the time taken for one complete oscillation of the pendulum. We repeated this measurement for different lengths of the pendulum and recorded the corresponding times. Using the formula $T=2\\pi\\sqrt{\\frac{L}{g}}$, where $T$ is the period of the pendulum, $L$ is the length of the pendulum, and $g$ is the acceleration due to gravity, we calculated the value of $g$. The period $T$ can also be expressed in terms of the frequency $f$ using the equation $T=\\frac{1}{f}$.\n
\n\nThe results showed that the value of acceleration due to gravity was $9.81 \\text{ m/s}^2$, which is consistent with the accepted value. We also found that the period of the pendulum increased with increasing length, as predicted by the formula $T=2\\pi\\sqrt{\\frac{L}{g}}$. The relationship between the length and period of the pendulum can be expressed as $T^2=\\frac{4\\pi^2}{g}L$, which is a linear relationship with a slope of $\\frac{4\\pi^2}{g}$.\n
\n", - "about": { - "@id": "#category-R&D" - }, - "variableMeasured": null, - "aggregateRating": { - "@type": "AggregateRating", - "ratingValue": 4, - "reviewCount": 1 - } + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.mol", + "@type": "File", + "name": "example.mol", + "alternateName": "5f/5f714e9ae73ce08838ada36b17d1d9ba1e4983665093b079a93f3264d1dec844481010204e77799078528c82e721d61f860cfc93685104620a5d2af5a4361675.mol", + "contentSize": 1664, + "sha256": "5622cb4d7a5e6166a3527345ffc864a768cd03c3f77511a5988853c402c504a4" }, { - "@id": "#category-Demo", - "@type": "Thing", - "name": "Demo" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.json", + "@type": "File", + "name": "example.json", + "alternateName": "1f/1f26c34624fb61c29f4f69bc6d62bc1079bb096e29e387faf62c932d14fdf19d063d81b9a1db514c2355cc773288410843f4119d05ca9a3b9e32aaa7a0a2bb61.json", + "contentSize": 1734, + "sha256": "58de2671fcd268ffd1706d5e217bac191b02354f0345a0ee948fa1139600b988" }, { - "@id": "./Demo - Synthesis-of-Aspirin - 6bc46aec/", - "@type": "Dataset", - "author": { - "@id": "person://ec7c1f6cde2fe4f2edab2ef88546f997f5f9c2328c4bbd4de99309f49b0161f7?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:49+02:00", - "dateModified": "2024-06-17T20:56:43+02:00", - "name": "Synthesis of Aspirin", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=315", - "genre": "experiment", - "creativeWorkStatus": "Success", - "identifier": "20240617-6bc46aec1f90e105d3c91b641accfe804a843b51", - "keywords": "generated from yml,chemistry,has-mathjax", - "text": "\nAspirin is a widely used pain-relieving and anti-inflammatory drug. In this experiment, we aimed to synthesize aspirin from salicylic acid and acetic anhydride.\n
\n\nWe mixed salicylic acid and acetic anhydride in the presence of a catalyst, sulfuric acid. The reaction produced aspirin and acetic acid, as shown in the following chemical equation:\n
\n\n$$\\ce{C7H6O3 + (CH3CO)2O ->[\\text{H2SO4}] C9H8O4 + CH3COOH}$$\n
\n\nAfter the reaction, we purified the aspirin by recrystallization from hot water. The purity of the aspirin was confirmed using thin-layer chromatography (TLC) and melting point analysis.\n
\n\nThe yield of aspirin was 80% based on the amount of salicylic acid used. The purity of the aspirin was confirmed using TLC, which showed a single spot corresponding to aspirin. The melting point of the aspirin was 135-136\u00b0C, which is consistent with the literature value of 135-136.5\u00b0C.\n
\n\nThe chemical reaction involved in the synthesis of aspirin can be written as:\n
\n\n$$\\ce{C7H6O3 + (CH3CO)2O ->[\\text{H2SO4}] C9H8O4 + CH3COOH}$$\n
\n\nThe theoretical yield of aspirin can be calculated using the stoichiometry of the reaction. Assuming that all the salicylic acid reacts and no aspirin is lost during the purification process, the theoretical yield is calculated as follows:\n
\n\n$$\\text{Theoretical yield} = \\frac{\\text{moles of salicylic acid used}}{\\text{molar ratio of salicylic acid to aspirin}} \\times \\text{molar mass of aspirin}$$\n
\n\nThe actual yield of aspirin can be calculated by dividing the mass of the purified aspirin by the mass of salicylic acid used and multiplying by 100%. The percent yield can be calculated by dividing the actual yield by the theoretical yield and multiplying by 100%.\n
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The yield and purity look good. For the wash steps, consider extending the final centrifugation to 3 minutes to ensure no residual buffer. Nice work!", + "dateCreated": "2024-11-17T03:01:58+01:00", + "text": "Oh, how fascinating. I'm sure the groundbreaking discovery that water is wet will change the course of human history forever.", "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" } }, { - "@id": "./Project-CRYPTO-COOL - Gold-master-experiment - df81f900/example.jpg", - "@type": "File", - "name": "example.jpg", - "alternateName": "c0/c03da8102ecfb2922b844da8cbf762dd13ccafaa6089ad38223e10edeaf1b64b2b5d22be4232056a2cbf983d9c4de14dc9df859c750089568253094f8bfde798.jpg", - "contentSize": 85530, - "sha256": "b73626c9a9ed8561ed6126df2493bc0d84fb8feedc9fe34aed94f7d2d5f4f60f" + "@id": "comment://21df88ad372de913f72d5a6ae3add04fda3c672ad68d3ebe74c9ee3aefe07468?hash_algo=sha256", + "@type": "Comment", + "dateCreated": "2024-11-17T03:01:58+01:00", + "text": "Well, it's a relief to see that the scientific community is hard at work discovering what we already suspected: that the sky is indeed blue. I can't wait for their next groundbreaking revelation that grass is green.", + "author": { + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" + } }, { - "@id": "#category-Tests", + "@id": "#category-Project CRYPTO-COOL", "@type": "Thing", - "name": "Tests" + "name": "Project CRYPTO-COOL", + "color": "745cb8" }, { - "@id": "./Tests - Numquam-delectus-sint-quis-sint-cupiditate-non-voluptatem - 10df895d/", + "@id": "./Project-CRYPTO-COOL - An-example-experiment - 7c69b55a/", "@type": "Dataset", "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:03:46+02:00", - "dateModified": "2024-06-17T20:03:46+02:00", - "name": "Numquam delectus sint quis sint cupiditate non voluptatem.", + "dateCreated": "2024-11-17T03:01:58+01:00", + "dateModified": "2024-11-17T03:01:58+01:00", + "temporal": "2025-01-01T00:00:00+01:00", + "name": "An example experiment", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=32", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=256", "genre": "experiment", + "comment": [ + { + "@id": "comment://da67bf031aa9176e3382e0991140f998f9c622cccd348f673b3a36caa086344d?hash_algo=sha256" + }, + { + "@id": "comment://21df88ad372de913f72d5a6ae3add04fda3c672ad68d3ebe74c9ee3aefe07468?hash_algo=sha256" + } + ], "creativeWorkStatus": "Success", - "identifier": "20240617-10df895d5f87320d8ee573007feab824683092c0", - "keywords": "biological samples", - "text": "Go on!' 'I'm a poor man, your Majesty,' said Alice in a low, weak voice. 'Now, I give you fair warning,' shouted the Queen. 'You make me larger, it must be on the whole pack rose up into the sea, though you mayn't believe it--' 'I never thought about it,' said Alice, (she had grown up,' she said to herself, and nibbled a little bit, and said to the waving of the sort. Next came the royal children, and everybody else. 'Leave off that!' screamed the Pigeon. 'I can see you're trying to invent something!' 'I--I'm a little while, however, she waited patiently. 'Once,' said the Dodo solemnly presented the thimble, saying 'We beg your pardon,' said Alice aloud, addressing nobody in particular. 'She'd soon fetch it back!' 'And who is Dinah, if I know all the jurors had a large dish of tarts upon it: they looked so good, that it signifies much,' she said this she looked back once or twice she had hurt the poor child, 'for I never was so large a house, that she began shrinking directly. As.", + "identifier": "20241117-7c69b55a8dcc83df0c6c83ee96e8e888bc189061", + "keywords": "example,demo", + "text": "This is the content of the experiment", "about": { - "@id": "#category-Tests" - } + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": null }, { - "@id": "#category-Project CRYPTO-COOL", + "@id": "#category-Default", "@type": "Thing", - "name": "Project CRYPTO-COOL" + "name": "Default", + "color": "29AEB9" + }, + { + "@id": "./Default - Ducimus-dolores-deserunt-beatae-aut-odit-vel - 27800bd8/", + "@type": "Dataset", + "author": { + "@id": "person://c8bc7d581ea61b54c0a608a683b080162a45e6391e157c71fd0c38fe9a57ff2f?hash_algo=sha256" + }, + "dateCreated": "2024-11-17T03:00:06+01:00", + "dateModified": "2024-11-17T03:00:07+01:00", + "temporal": "2021-09-26T00:00:00+02:00", + "name": "Ducimus dolores deserunt beatae aut odit vel.", + "encodingFormat": "text/html", + "url": "https://demo.elabftw.net/database.php.php?mode=view&id=50", + "genre": "resource", + "creativeWorkStatus": "Maintenance mode", + "identifier": "20241117-27800bd83ac183935a76ac21e6b6054b88e4a719", + "keywords": "spectroscopy,biotechnology,gene expression,FRET,statistical analysis", + "text": "King, 'and don't look at them--'I wish they'd get the trial done,' she thought, 'till its ears have come, or at least one of the house opened, and a crash of broken glass. 'What a number of changes she had a head unless there was Mystery,' the Mock Turtle, 'Drive on, old fellow! Don't be all day about it!' Last came a rumbling of little pebbles came rattling in at all?' said Alice, in a large piece out of the shelves as she could, and soon found herself falling down a very short time the Mouse to tell me your history, she do.' 'I'll tell it her,' said the March Hare went 'Sh! sh!' and the procession came opposite to Alice, very much what would happen next. The first question of course you don't!' the Hatter began, in a large ring, with the game,' the Queen never left off when they liked, so that altogether, for the hedgehogs; and in despair she put it. She felt that it would be four thousand miles down, I think--' (for, you see, as she could. 'The Dormouse is asleep again,' said the.", + "about": { + "@id": "#category-Default" + } }, { - "@id": "./Project-CRYPTO-COOL - Gold-master-experiment - df81f900/", + "@id": "./Project-CRYPTO-COOL - Synthesis-and-Characterization-of-a-Novel-Organic-Compound-with-Antimicrobial- - c686e77b/", "@type": "Dataset", "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:05:47+02:00", - "dateModified": "2024-06-17T20:31:53+02:00", - "name": "Gold master experiment", + "dateCreated": "2024-11-17T03:01:59+01:00", + "dateModified": "2024-11-17T03:01:59+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "Synthesis and Characterization of a Novel Organic Compound with Antimicrobial Properties", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=310", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=258", "genre": "experiment", - "comment": [ + "creativeWorkStatus": "Fail", + "identifier": "20241117-c686e77bb6839af2531d0193575e91825656c039", + "keywords": "synthesis,antimicrobial,chemistry", + "mentions": [ { - "@id": "comment://35ad6df21b3c5c44e7373908133057fa6ac95983878df8e017d934c2ae42f760?hash_algo=sha256" + "@id": "./Default - Ducimus-dolores-deserunt-beatae-aut-odit-vel - 27800bd8/" } ], + "text": "\nThe emergence of drug-resistant bacterial strains has become a major public health concern, highlighting the need for the development of new antimicrobial agents. In this study, we aimed to synthesize a novel organic compound with potential antimicrobial activity.\n
\n\nThe compound was synthesized via a multi-step reaction scheme. The starting material, benzaldehyde, was reacted with aniline in the presence of an acid catalyst to form the intermediate product, N-phenylbenzamide. The intermediate product was then reacted with thionyl chloride to form the corresponding acid chloride. The acid chloride was then reacted with aminoguanidine in the presence of a base catalyst to form the final product, which was purified by recrystallization.\n
\n\nThe synthesized compound was characterized using various spectroscopic techniques. The melting point of the compound was determined using a melting point apparatus and compared to the literature value. The IR spectrum of the compound was obtained using a Fourier transform infrared spectrometer and compared to the expected spectrum. The NMR spectrum of the compound was obtained using a nuclear magnetic resonance spectrometer and analyzed to confirm the structure of the compound.\n
\n\nThe antimicrobial activity of the synthesized compound was evaluated against several bacterial strains using the disk diffusion method. The results showed that the compound exhibited significant antimicrobial activity against both Gram-positive and Gram-negative bacteria, suggesting its potential as a new antimicrobial agent.\n
\n", + "about": { + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": null, + "aggregateRating": { + "@type": "AggregateRating", + "ratingValue": 1, + "reviewCount": 1 + } + }, + { + "@id": "./Project-CRYPTO-COOL - Transfection-of-p103\u039412-22-into-RPE-1-Actin-RFP - fcab150c/", + "@type": "Dataset", + "author": { + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" + }, + "dateCreated": "2024-11-17T03:01:58+01:00", + "dateModified": "2024-11-17T03:01:59+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "Transfection of p103\u039412-22 into RPE-1 Actin-RFP", + "encodingFormat": "text/html", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=257", + "genre": "experiment", "creativeWorkStatus": "Success", - "hasPart": [ + "identifier": "20241117-fcab150c3e9fe4766f2d2a2fee2291c4903c2bf9", + "keywords": "transfection,biocell,RPE-1", + "text": "Transfecting the plasmid p103\u039412-22 into the RPE-1 Actin-RFP cells and look at the death rate.
", + "about": { + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": null + }, + { + "@id": "./Default - Distinctio-consectetur-vero-quisquam-impedit - 36d0f66b/", + "@type": "Dataset", + "author": { + "@id": "person://c8bc7d581ea61b54c0a608a683b080162a45e6391e157c71fd0c38fe9a57ff2f?hash_algo=sha256" + }, + "dateCreated": "2024-11-17T03:00:07+01:00", + "dateModified": "2024-11-17T03:00:07+01:00", + "temporal": "2023-05-23T00:00:00+02:00", + "name": "Distinctio consectetur vero quisquam impedit.", + "encodingFormat": "text/html", + "url": "https://demo.elabftw.net/database.php.php?mode=view&id=51", + "genre": "resource", + "creativeWorkStatus": "Operational", + "identifier": "20241117-36d0f66b03b4cb38b9ac354713d1e2cd0113831f", + "keywords": "spectroscopy,Project X,genetics,Secret", + "text": "I must go back by railway,' she said this, she was to get her head on her toes when they arrived, with a little animal (she couldn't guess of what work it would all come wrong, and she tried to get her head impatiently; and, turning to Alice, she went on 'And how many hours a day or two: wouldn't it be of very little use, as it lasted.) 'Then the words did not like to show you! A little bright-eyed terrier, you know, with oh, such long curly brown hair! And it'll fetch things when you have of putting things!' 'It's a Cheshire cat,' said the Lory, as soon as she spoke--fancy CURTSEYING as you're falling through the door, she walked on in these words: 'Yes, we went to school in the sky. Twinkle, twinkle--\"' Here the Queen added to one of its little eyes, but it was the Cat again, sitting on the look-out for serpents night and day! Why, I haven't had a large plate came skimming out, straight at the Gryphon said to Alice; and Alice rather unwillingly took the hookah into its face to see.", + "about": { + "@id": "#category-Default" + } + }, + { + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/", + "@type": "Dataset", + "author": { + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" + }, + "dateCreated": "2024-11-17T03:02:01+01:00", + "dateModified": "2024-11-17T15:10:07+01:00", + "temporal": "2025-03-03T00:00:00+01:00", + "name": "Testing the eLabFTW lab notebook", + "encodingFormat": "text/html", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=263", + "genre": "experiment", + "comment": [ { - "@id": "./Project-CRYPTO-COOL - Gold-master-experiment - df81f900/example.jpg" + "@id": "comment://4fb80877aeb18492a13ff6ae43049f5730b7846e97a9b99d70397f5ddaf5945d?hash_algo=sha256" } ], - "identifier": "20240617-df81f90072b7768da5c80baa3bc962bbc7b3604a", - "keywords": "generated from yml,test-data,eln,tag with space,special chars {[\u00e9\u00e8\u00c0\u00ae]}:*<>\u00d7\u00f7\u00b1", - "mentions": [ + "creativeWorkStatus": "Running", + "hasPart": [ { - "@id": "./Tests - Numquam-delectus-sint-quis-sint-cupiditate-non-voluptatem - 10df895d/" - } - ], - "text": "The goal of this experiment is to have all attributes:
\nSomething | \nin H2 | \nthe | \n
table | \n31321 | \nthere | \n
an emoji: \ud83e\udd2a
\n\u221e \u2211
\n\u00a0
", - "about": { - "@id": "#category-Project CRYPTO-COOL" - }, - "variableMeasured": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/README.md" + }, { - "propertyID": "elabftw_metadata", - "description": "eLabFTW metadata JSON as string", - "value": "{\"elabftw\": {\"display_main_text\": true, \"extra_fields_groups\": [{\"id\": 1, \"name\": \"Group 1\"}, {\"id\": 2, \"name\": \"Group 2\"}, {\"id\": 3, \"name\": \"Last group\"}]}, \"extra_fields\": {\"Number\": {\"type\": \"number\", \"unit\": \"\", \"units\": [], \"value\": \"\", \"group_id\": 2, \"description\": \"no units\"}, \"Type URL\": {\"type\": \"url\", \"value\": \"https://www.elabftw.net\", \"group_id\": 2, \"readonly\": true, \"description\": \"a link (readonly)\"}, \"Just time\": {\"type\": \"time\", \"value\": \"17:00\", \"group_id\": 2, \"description\": \"tea time\"}, \"Some date\": {\"type\": \"date\", \"value\": \"2024-07-14\", \"group_id\": 2, \"description\": \"is a date\"}, \"Type user\": {\"type\": \"users\", \"value\": 1, \"group_id\": 3, \"description\": \"this is a link to a user\"}, \"A checkbox\": {\"type\": \"checkbox\", \"value\": \"on\", \"group_id\": 2, \"description\": \"is checked\"}, \"Email input\": {\"type\": \"email\", \"value\": \"louis@example.com\", \"group_id\": 2, \"description\": \"type email\"}, \"Date and time\": {\"type\": \"datetime-local\", \"value\": \"2024-07-14T13:37\", \"group_id\": 2, \"description\": \"datetime description\"}, \"Radio buttons\": {\"type\": \"radio\", \"value\": \"Oui\", \"options\": [\"Oui\", \"Non\", \"Peut-\u00eatre\"], \"group_id\": 1, \"description\": \"radio description\"}, \"Type resource\": {\"type\": \"items\", \"value\": 208, \"group_id\": 3, \"description\": \"This is a link to a resource\"}, \"A dropdown menu\": {\"type\": \"select\", \"value\": \"Choice 1\", \"options\": [\"Choice 1\", \"Choice 2\", \"Choice 3\"], \"group_id\": 1, \"description\": \"Single select\"}, \"Text input name\": {\"type\": \"text\", \"value\": \"some text\", \"group_id\": 1, \"readonly\": true, \"required\": true, \"description\": \"type text + all attributes\", \"blank_value_on_duplicate\": true}, \"Type experiment\": {\"type\": \"experiments\", \"value\": 373, \"group_id\": 3, \"description\": \"This is a link to an experiment\"}, \"Number with units\": {\"type\": \"number\", \"unit\": \"mM\", \"units\": [\"mM\", \"\u03bcM\", \"nM\"], \"value\": \"\", \"group_id\": 2, \"description\": \"this one has units\"}, \"Unchecked checkbox\": {\"type\": \"checkbox\", \"value\": \"\", \"group_id\": 2, \"description\": \"this one is not checked\"}, \"Multi dropdown menu\": {\"type\": \"select\", \"value\": \"Option 1\", \"options\": [\"Option 1\", \"Option 2\", \"Option 3\"], \"group_id\": 1, \"description\": \"Allows multiple selection\", \"allow_multi_values\": true}}}" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.avi" }, { - "@type": "PropertyValue", - "propertyID": "Number", - "valueReference": "number", - "value": "", - "description": "no units" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.bmp" }, { - "@type": "PropertyValue", - "propertyID": "Type URL", - "valueReference": "url", - "value": "https://www.elabftw.net", - "description": "a link (readonly)" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.epub" }, { - "@type": "PropertyValue", - "propertyID": "Just time", - "valueReference": "time", - "value": "17:00", - "description": "tea time" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.gif" }, { - "@type": "PropertyValue", - "propertyID": "Some date", - "valueReference": "date", - "value": "2024-07-14", - "description": "is a date" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.mol" }, { - "@type": "PropertyValue", - "propertyID": "Type user", - "valueReference": "users", - "value": 1, - "description": "this is a link to a user" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.json" }, { - "@type": "PropertyValue", - "propertyID": "A checkbox", - "valueReference": "checkbox", - "value": "on", - "description": "is checked" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.jpg" }, { - "@type": "PropertyValue", - "propertyID": "Email input", - "valueReference": "email", - "value": "louis@example.com", - "description": "type email" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.jdx" }, { - "@type": "PropertyValue", - "propertyID": "Date and time", - "valueReference": "datetime-local", - "value": "2024-07-14T13:37", - "description": "datetime description" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.jcamp" }, { - "@type": "PropertyValue", - "propertyID": "Radio buttons", - "valueReference": "radio", - "value": "Oui", - "description": "radio description" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.gbk" }, { - "@type": "PropertyValue", - "propertyID": "Type resource", - "valueReference": "items", - "value": 208, - "description": "This is a link to a resource" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.docx" }, { - "@type": "PropertyValue", - "propertyID": "A dropdown menu", - "valueReference": "select", - "value": "Choice 1", - "description": "Single select" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.dna" }, { - "@type": "PropertyValue", - "propertyID": "Text input name", - "valueReference": "text", - "value": "some text", - "description": "type text + all attributes" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.cdx" }, { - "@type": "PropertyValue", - "propertyID": "Type experiment", - "valueReference": "experiments", - "value": 373, - "description": "This is a link to an experiment" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.pdf" }, { - "@type": "PropertyValue", - "propertyID": "Number with units", - "valueReference": "number", - "value": "", - "description": "this one has units", - "unitText": "mM" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.odp" }, { - "@type": "PropertyValue", - "propertyID": "Unchecked checkbox", - "valueReference": "checkbox", - "value": "", - "description": "this one is not checked" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.pdb" }, { - "@type": "PropertyValue", - "propertyID": "Multi dropdown menu", - "valueReference": "select", - "value": "Option 1", - "description": "Allows multiple selection" - } - ] - }, - { - "@id": "#category-Generated", - "@type": "Thing", - "name": "Generated" - }, - { - "@id": "./Generated - Architecto-est-recusandae-tempora-facilis-nemo - 67d460ac/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:04:04+02:00", - "dateModified": "2024-06-17T20:04:05+02:00", - "name": "Architecto est recusandae tempora facilis nemo.", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/database.php?mode=view&id=50", - "genre": "resource", - "creativeWorkStatus": "Destroyed", - "identifier": "20240617-67d460ac1b3d558fe0c8019e934d3d2a17c62501", - "keywords": "ecology", - "text": "I eat\" is the driest thing I ask! It's always six o'clock now.' A bright idea came into Alice's head. 'Is that the poor little thing howled so, that Alice said; 'there's a large cat which was sitting between them, fast asleep, and the moment how large she had somehow fallen into the garden. Then she went on, without attending to her; 'but those serpents! There's no pleasing them!' Alice was not a moment to be executed for having missed their turns, and she put one arm out of that is--\"Birds of a muchness\"--did you ever eat a little way out of the hall: in fact she was coming to, but it makes rather a hard word, I will prosecute YOU.--Come, I'll take no denial; We must have been a RED rose-tree, and we put a stop to this,' she said this, she came rather late, and the baby violently up and rubbed its eyes: then it chuckled. 'What fun!' said the Mouse. 'Of course,' the Gryphon replied rather crossly: 'of course you know that Cheshire cats always grinned; in fact, I didn't know that.", - "about": { - "@id": "#category-Generated" - }, - "step": [ - { - "@type": "HowToStep", - "position": 1, - "creativeWorkStatus": "unfinished", - "itemListElement": [ - { - "@type": "HowToDirection", - "text": "voluptatemaperiam" - } - ] + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.png" }, { - "@type": "HowToStep", - "position": 2, - "creativeWorkStatus": "unfinished", - "itemListElement": [ - { - "@type": "HowToDirection", - "text": "laborumsoluta" - } - ] - } - ] - }, - { - "@id": "./Generated - Minus-qui-dolorem-praesentium-quos-aliquam-quia-ea - 18fd5717/quout.json", - "@type": "File", - "name": "quout.json", - "alternateName": "9c/9c1e8941b5f8c8c426d14d2aee478e5ae4e77cf75ae9944fa5b2d8f8938e47ec01b980ffa44330224c19775e9e7be50fd9128829052734ee72f90b907c2f7c71.json", - "contentSize": 21, - "sha256": "66bd0965616378a8b4698bf8b01784e7d29f15c7bde4fe86fb4f5dc959cf189c" - }, - { - "@id": "./Generated - Minus-qui-dolorem-praesentium-quos-aliquam-quia-ea - 18fd5717/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:04:05+02:00", - "dateModified": "2024-06-17T20:04:05+02:00", - "name": "Minus qui dolorem praesentium quos aliquam quia ea.", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/database.php?mode=view&id=51", - "genre": "resource", - "creativeWorkStatus": "Waiting", - "hasPart": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.pps" + }, { - "@id": "./Generated - Minus-qui-dolorem-praesentium-quos-aliquam-quia-ea - 18fd5717/quout.json" - } - ], - "identifier": "20240617-18fd5717439c845d64c430b390521236efa0ed3d", - "keywords": "microbiology,HeLa,cell culture techniques,lab supplies,research methodology,scientific discovery", - "text": "Alice considered a little girl,' said Alice, always ready to make out exactly what they WILL do next! As for pulling me out of a good deal: this fireplace is narrow, to be patted on the Duchess's cook. She carried the pepper-box in her lessons in here? Why, there's hardly room for YOU, and no one could possibly hear you.' And certainly there was a table, with a cart-horse, and expecting every moment to think about it, you know--' 'But, it goes on \"THEY ALL RETURNED FROM HIM TO YOU,\"' said Alice. 'I don't see how he can EVEN finish, if he thought it would be only rustling in the last words out loud, and the Queen till she shook the house, and have next to no toys to play croquet.' The Frog-Footman repeated, in the window, and one foot to the company generally, 'You are not attending!' said the Cat. 'I said pig,' replied Alice; 'and I wish I had to leave the court; but on the floor, as it didn't sound at all for any lesson-books!' And so she sat on, with closed eyes, and half believed." - }, - { - "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 8ebcfca1/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:49+02:00", - "dateModified": "2024-06-17T20:54:35+02:00", - "name": "Testing the eLabFTW lab notebook", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=316", - "genre": "experiment", - "comment": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.ppsx" + }, { - "@id": "comment://872b3203f9aecfd279e25bde60cdb7fbf4f7ddc16bf52028aeee9b7a4b3dcdde?hash_algo=sha256" - } - ], - "creativeWorkStatus": "Running", - "hasPart": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.tif" + }, { - "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 8ebcfca1/example.docx" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.pptx" }, { - "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 8ebcfca1/example.dna" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.wav" }, { - "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 8ebcfca1/example.cif" - } - ], - "identifier": "20240617-8ebcfca10c816e3ff3a9d0fe00e367b9b8ab1811", - "keywords": "generated from yml,demo,test", - "mentions": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.mp4" + }, { - "@id": "./Project-CRYPTO-COOL - Gold-master-experiment - df81f900/" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.webm" }, { - "@id": "./Generated - Architecto-est-recusandae-tempora-facilis-nemo - 67d460ac/" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.aac" }, { - "@id": "./Generated - Minus-qui-dolorem-praesentium-quos-aliquam-quia-ea - 18fd5717/" - } - ], - "text": "Test the software.
\nClick everywhere and explore everything.
\nIt's really nice, I think I'll adopt it for our lab.
", - "variableMeasured": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.mp3" + }, { - "propertyID": "elabftw_metadata", - "description": "eLabFTW metadata JSON as string", - "value": "{\"extra_fields\": {\"OMERO dataset url\": {\"type\": \"url\", \"value\": \"https://omero.uni.example.edu/viewer?team=39&project=194\", \"description\": \"Link to the OMERO server\"}, \"Annie, are you okay\": {\"type\": \"checkbox\", \"value\": \"\", \"description\": \"This is a checkbox custom input\"}, \"This is a custom list input\": {\"type\": \"select\", \"value\": \"Some choice\", \"options\": [\"Some choice\", \"Another choice\", \"A third choice\"], \"description\": \"The value is selected from a pre-defined list\"}}}" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.ogg" }, { - "@type": "PropertyValue", - "propertyID": "OMERO dataset url", - "valueReference": "url", - "value": "https://omero.uni.example.edu/viewer?team=39&project=194", - "description": "Link to the OMERO server" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.flac" }, { - "@type": "PropertyValue", - "propertyID": "Annie, are you okay", - "valueReference": "checkbox", - "value": "", - "description": "This is a checkbox custom input" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.ape" }, { - "@type": "PropertyValue", - "propertyID": "This is a custom list input", - "valueReference": "select", - "value": "Some choice", - "description": "The value is selected from a pre-defined list" - } - ], - "aggregateRating": { - "@type": "AggregateRating", - "ratingValue": 5, - "reviewCount": 1 - } - }, - { - "@id": "./Project-CRYPTO-COOL - Effect-of-temperature-on-enzyme-activity - d938ab84/", - "@type": "Dataset", - "author": { - "@id": "person://b344adffee437ab4a11d1c722fd096492f586b0d47854a3761efb68647b7b84c?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:48+02:00", - "dateModified": "2024-06-17T20:05:48+02:00", - "name": "Effect of temperature on enzyme activity", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=313", - "genre": "experiment", - "creativeWorkStatus": "Need to be redone", - "identifier": "20240617-d938ab84ea960b6c6ec3f9c717ba7c3cd29d7506", - "keywords": "generated from yml,enzymology,test,Project ENZYTEMP", - "text": "\nEnzymes are biological molecules that catalyze chemical reactions in living organisms. In this experiment, we investigated the effect of temperature on the activity of the enzyme amylase, which catalyzes the hydrolysis of starch into glucose.\n
\n\nWe prepared a solution of starch and added a small amount of amylase to the solution. We then incubated the solution at different temperatures, ranging from 4\u00b0C to 70\u00b0C, for 5 minutes. After the incubation period, we added iodine to the solution to detect the presence of starch. The disappearance of the blue-black color of the iodine indicated the breakdown of starch into glucose.\n
\n\nThe results showed that the activity of amylase increased with increasing temperature up to 37\u00b0C, which is the optimum temperature for amylase activity. At temperatures above 37\u00b0C, the activity of amylase decreased rapidly, and at 70\u00b0C, the enzyme was completely denatured and lost its catalytic activity.\n
\n\nThe relationship between temperature and enzyme activity can be described by the Arrhenius equation, which relates the rate constant of a reaction to the activation energy and temperature. The equation can be written as:\n
\n\n$$k = Ae^{-E_a/RT}$$\n
\n\nwhere k is the rate constant, A is the pre-exponential factor, E_a is the activation energy, R is the gas constant, and T is the absolute temperature. The activation energy is the energy required to break the bonds in the reactants and form the products. The rate constant increases with increasing temperature due to the increase in the number of reactant molecules with sufficient kinetic energy to overcome the activation energy barrier.\n
\n\nThe effect of temperature on enzyme activity can also be described by the Q10 value, which is the ratio of the reaction rate at a given temperature to the reaction rate at a temperature 10\u00b0C lower. The Q10 value for most enzyme-catalyzed reactions is around 2-3, indicating that the reaction rate doubles or triples with each 10\u00b0C increase in temperature.\n
\n", - "variableMeasured": null - }, - { - "@id": "./Project-CRYPTO-COOL - \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76 - f44d2c0b/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:48+02:00", - "dateModified": "2024-06-17T20:05:48+02:00", - "name": "\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=312", - "genre": "experiment", - "creativeWorkStatus": "Success", - "identifier": "20240617-f44d2c0ba07593d783c6ddc35c3d10bc29f12aa5", - "keywords": "generated from yml,CJK,\u30b7\u30e7\u30a6\u30b8\u30e7\u30a6\u30d0\u30a8", - "text": "\u80cc\u666f\uff1a \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306f\u3001\u679c\u7269\u306e\u6210\u719f\u904e\u7a0b\u306b\u5927\u304d\u306a\u5f71\u97ff\u3092\u4e0e\u3048\u307e\u3059\u3002\u305d\u306e\u305f\u3081\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u3064\u3044\u3066\u7814\u7a76\u3059\u308b\u3053\u3068\u306f\u3001\u679c\u7269\u7523\u696d\u306b\u3068\u3063\u3066\u91cd\u8981\u306a\u610f\u7fa9\u3092\u6301\u3061\u307e\u3059\u3002
\n\n\u76ee\u7684\uff1a \u3053\u306e\u7814\u7a76\u306e\u76ee\u7684\u306f\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u597d\u3093\u3067\u98df\u3079\u308b\u679c\u7269\u306e\u7a2e\u985e\u3092\u8abf\u3079\u308b\u3053\u3068\u3067\u3059\u3002
\n\n\u65b9\u6cd5\uff1a \u307e\u305a\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u3092\u6355\u7372\u3057\u3001\u5b9f\u9a13\u5ba4\u3067\u98fc\u80b2\u3057\u307e\u3059\u3002\u6b21\u306b\u3001\u679c\u7269\u3092\u8907\u6570\u7528\u610f\u3057\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u304c\u597d\u3093\u3067\u98df\u3079\u308b\u679c\u7269\u3092\u8abf\u3079\u307e\u3059\u3002\u679c\u7269\u306f\u3001\u30ea\u30f3\u30b4\u3001\u30d0\u30ca\u30ca\u3001\u30aa\u30ec\u30f3\u30b8\u3001\u30ad\u30a6\u30a4\u30d5\u30eb\u30fc\u30c4\u3001\u30b0\u30ec\u30fc\u30d7\u30d5\u30eb\u30fc\u30c4\u3001\u30d1\u30a4\u30ca\u30c3\u30d7\u30eb\u3001\u30de\u30f3\u30b4\u30fc\u306e7\u7a2e\u985e\u3092\u7528\u610f\u3057\u307e\u3059\u3002\u5404\u679c\u7269\u30921\u3064\u305a\u3064\u30b1\u30fc\u30b8\u306e\u4e2d\u306b\u5165\u308c\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u304c\u679c\u7269\u3092\u98df\u3079\u305f\u304b\u3069\u3046\u304b\u3092\u78ba\u8a8d\u3057\u307e\u3059\u3002\u679c\u7269\u306f\u6bce\u65e5\u4ea4\u63db\u3057\u3001\u540c\u3058\u679c\u7269\u304c\u9023\u7d9a\u3057\u3066\u5165\u308c\u3089\u308c\u306a\u3044\u3088\u3046\u306b\u3057\u307e\u3059\u3002\u307e\u305f\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u304c\u679c\u7269\u3092\u98df\u3079\u308b\u6642\u9593\u5e2f\u3082\u8abf\u3079\u307e\u3059\u3002
\n\n\u7d50\u679c\uff1a \u5b9f\u9a13\u306e\u7d50\u679c\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u304c\u597d\u3093\u3067\u98df\u3079\u308b\u679c\u7269\u306f\u3001\u30d0\u30ca\u30ca\u3001\u30de\u30f3\u30b4\u30fc\u3001\u30d1\u30a4\u30ca\u30c3\u30d7\u30eb\u3067\u3042\u308b\u3053\u3068\u304c\u308f\u304b\u308a\u307e\u3057\u305f\u3002\u307e\u305f\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u304c\u679c\u7269\u3092\u98df\u3079\u308b\u6642\u9593\u5e2f\u306f\u3001\u5348\u524d\u4e2d\u304c\u591a\u3044\u3053\u3068\u304c\u308f\u304b\u308a\u307e\u3057\u305f\u3002
\n\n\u7d50\u8ad6\uff1a \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306f\u3001\u30d0\u30ca\u30ca\u3001\u30de\u30f3\u30b4\u30fc\u3001\u30d1\u30a4\u30ca\u30c3\u30d7\u30eb\u3092\u597d\u3093\u3067\u98df\u3079\u308b\u3053\u3068\u304c\u660e\u3089\u304b\u306b\u306a\u308a\u307e\u3057\u305f\u3002\u3053\u306e\u7d50\u679c\u306f\u3001\u679c\u7269\u751f\u7523\u696d\u306b\u3068\u3063\u3066\u91cd\u8981\u306a\u60c5\u5831\u3068\u306a\u308a\u307e\u3059\u3002
\n", - "variableMeasured": null - }, - { - "@id": "./Project-CRYPTO-COOL - Synthesis-and-Characterization-of-a-Novel-Organic-Compound-with-Antimicrobial- - 412e346f/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:47+02:00", - "dateModified": "2024-06-17T20:05:48+02:00", - "name": "Synthesis and Characterization of a Novel Organic Compound with Antimicrobial Properties", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=311", - "genre": "experiment", - "creativeWorkStatus": "Fail", - "identifier": "20240617-412e346fec91249c16c95a24d8a3253cd6a5f277", - "keywords": "generated from yml,synthesis,antimicrobial,chemistry", - "mentions": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.xyz" + }, { - "@id": "./Generated - Architecto-est-recusandae-tempora-facilis-nemo - 67d460ac/" - } - ], - "text": "\nThe emergence of drug-resistant bacterial strains has become a major public health concern, highlighting the need for the development of new antimicrobial agents. In this study, we aimed to synthesize a novel organic compound with potential antimicrobial activity.\n
\n\nThe compound was synthesized via a multi-step reaction scheme. The starting material, benzaldehyde, was reacted with aniline in the presence of an acid catalyst to form the intermediate product, N-phenylbenzamide. The intermediate product was then reacted with thionyl chloride to form the corresponding acid chloride. The acid chloride was then reacted with aminoguanidine in the presence of a base catalyst to form the final product, which was purified by recrystallization.\n
\n\nThe synthesized compound was characterized using various spectroscopic techniques. The melting point of the compound was determined using a melting point apparatus and compared to the literature value. The IR spectrum of the compound was obtained using a Fourier transform infrared spectrometer and compared to the expected spectrum. The NMR spectrum of the compound was obtained using a nuclear magnetic resonance spectrometer and analyzed to confirm the structure of the compound.\n
\n\nThe antimicrobial activity of the synthesized compound was evaluated against several bacterial strains using the disk diffusion method. The results showed that the compound exhibited significant antimicrobial activity against both Gram-positive and Gram-negative bacteria, suggesting its potential as a new antimicrobial agent.\n
\n", - "variableMeasured": null, - "aggregateRating": { - "@type": "AggregateRating", - "ratingValue": 1, - "reviewCount": 1 - } - }, - { - "@id": "./Project-CRYPTO-COOL - Transfection-of-p103\u039412-22-into-RPE-1-Actin-RFP - 4b08c8b1/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:47+02:00", - "dateModified": "2024-06-17T20:05:47+02:00", - "name": "Transfection of p103\u039412-22 into RPE-1 Actin-RFP", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=309", - "genre": "experiment", - "creativeWorkStatus": "Success", - "identifier": "20240617-4b08c8b1865d717c0e054062b7676da37f1a0d7a", - "keywords": "generated from yml,transfection,biocell,RPE-1", - "text": "Transfecting the plasmid p103\u039412-22 into the RPE-1 Actin-RFP cells and look at the death rate.
", - "variableMeasured": null - }, - { - "@id": "comment://0cd83513cb9f9fe47b791d23761fa5931621e7093c633c02da38630a91b5cbb2?hash_algo=sha256", - "@type": "Comment", - "dateCreated": "2024-06-17T20:05:46+02:00", - "text": "Oh, how fascinating. I'm sure the groundbreaking discovery that water is wet will change the course of human history forever.", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - } - }, - { - "@id": "comment://19b7fc4438ceccecb21e613a001c35a49a793a8126c6b7b257f5cd4bae874a61?hash_algo=sha256", - "@type": "Comment", - "dateCreated": "2024-06-17T20:05:46+02:00", - "text": "Well, it's a relief to see that the scientific community is hard at work discovering what we already suspected: that the sky is indeed blue. I can't wait for their next groundbreaking revelation that grass is green.", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - } - }, - { - "@id": "./Project-CRYPTO-COOL - An-example-experiment - 4ae900b8/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:46+02:00", - "dateModified": "2024-06-17T20:05:46+02:00", - "name": "An example experiment", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=308", - "genre": "experiment", - "comment": [ + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.sdf" + }, { - "@id": "comment://0cd83513cb9f9fe47b791d23761fa5931621e7093c633c02da38630a91b5cbb2?hash_algo=sha256" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/example.hevc" }, { - "@id": "comment://19b7fc4438ceccecb21e613a001c35a49a793a8126c6b7b257f5cd4bae874a61?hash_algo=sha256" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/elabftw-logo.png" } ], - "creativeWorkStatus": "Success", - "identifier": "20240617-4ae900b8e1a93afb825975f2a6ffe993007c6441", - "keywords": "generated from yml,example,demo", - "text": "This is the content of the experiment", - "variableMeasured": null - }, - { - "@id": "./Project-CRYPTO-COOL - Test-the-grouped-extra-fields - 4220974c/", - "@type": "Dataset", - "author": { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:05:46+02:00", - "dateModified": "2024-06-17T20:05:46+02:00", - "name": "Test the grouped extra fields", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=307", - "genre": "experiment", - "creativeWorkStatus": "Success", - "identifier": "20240617-4220974cfb1e4b36b215384b5c4f1f2cc472c833", - "keywords": "generated from yml,dev,extra fields", - "variableMeasured": [ + "identifier": "20241117-62e3c0a3fd90123288ba4647878e36718153ed64", + "keywords": "demo,test", + "mentions": [ { - "propertyID": "elabftw_metadata", - "description": "eLabFTW metadata JSON as string", - "value": "{\"elabftw\": {\"display_main_text\": false, \"extra_fields_groups\": [{\"id\": 1, \"name\": \"Group with id 1, first position\"}, {\"id\": 2, \"name\": \"Group with id 2, second position\"}, {\"id\": 3, \"name\": \"Group with id 3, third position\"}]}, \"extra_fields\": {\"Has group_id 3 as number\": {\"type\": \"text\", \"value\": \"\", \"group_id\": 3}, \"Has group_id 3 as string\": {\"type\": \"text\", \"value\": \"\", \"group_id\": \"3\"}, \"Has no group_id property\": {\"type\": \"text\", \"value\": \"\"}, \"Group_id 1 and position 1\": {\"type\": \"checkbox\", \"value\": \"\", \"group_id\": 1, \"position\": 1, \"description\": \"This is a checkbox custom input\"}, \"Group_id 2 and position 1\": {\"type\": \"url\", \"value\": \"\", \"group_id\": 2, \"position\": 1}, \"Group_id 2 and position 2\": {\"type\": \"url\", \"value\": \"https://datalake.example.com/experiments/3921\", \"group_id\": 2, \"position\": 2}, \"Group_id 2 and position 3\": {\"type\": \"url\", \"value\": \"\", \"group_id\": 2, \"position\": 3}, \"Another one without group_id property\": {\"type\": \"select\", \"value\": \"Some choice\", \"options\": [\"Some choice\", \"Another choice\", \"A third choice\"], \"description\": \"this element has no group property defined\"}, \"Has group_id that is not in elabftw.groups\": {\"type\": \"text\", \"value\": \"I am lost!\", \"group_id\": \"19\"}}}" + "@id": "./Project-CRYPTO-COOL - An-example-experiment - 7c69b55a/" }, { - "@type": "PropertyValue", - "propertyID": "Has group_id 3 as number", - "valueReference": "text", - "value": "" + "@id": "./Project-CRYPTO-COOL - Synthesis-and-Characterization-of-a-Novel-Organic-Compound-with-Antimicrobial- - c686e77b/" }, { - "@type": "PropertyValue", - "propertyID": "Has group_id 3 as string", - "valueReference": "text", - "value": "" + "@id": "./Project-CRYPTO-COOL - Transfection-of-p103\u039412-22-into-RPE-1-Actin-RFP - fcab150c/" }, { - "@type": "PropertyValue", - "propertyID": "Has no group_id property", - "valueReference": "text", - "value": "" + "@id": "./Default - Ducimus-dolores-deserunt-beatae-aut-odit-vel - 27800bd8/" }, { - "@type": "PropertyValue", - "propertyID": "Group_id 1 and position 1", - "valueReference": "checkbox", - "value": "", - "description": "This is a checkbox custom input" - }, + "@id": "./Default - Distinctio-consectetur-vero-quisquam-impedit - 36d0f66b/" + } + ], + "text": "Test the software.
Click everywhere and explore everything.
It's really nice, I think I'll adopt it for our lab.
", + "about": { + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": [ { - "@type": "PropertyValue", - "propertyID": "Group_id 2 and position 1", - "valueReference": "url", - "value": "" + "propertyID": "elabftw_metadata", + "description": "eLabFTW metadata JSON as string", + "value": "{\"extra_fields\": {\"Raw data URL\": {\"type\": \"url\", \"value\": \"https://datalake.example.com/experiments/3921\"}, \"Annie, are you okay\": {\"type\": \"checkbox\", \"value\": \"\", \"description\": \"This is a checkbox custom input\"}, \"This is a custom list input\": {\"type\": \"select\", \"value\": \"Some choice\", \"options\": [\"Some choice\", \"Another choice\", \"A third choice\"], \"description\": \"The value is selected from a pre-defined list\"}}}" }, { "@type": "PropertyValue", - "propertyID": "Group_id 2 and position 2", + "propertyID": "Raw data URL", "valueReference": "url", "value": "https://datalake.example.com/experiments/3921" }, { "@type": "PropertyValue", - "propertyID": "Group_id 2 and position 3", - "valueReference": "url", - "value": "" + "propertyID": "Annie, are you okay", + "valueReference": "checkbox", + "value": "", + "description": "This is a checkbox custom input" }, { "@type": "PropertyValue", - "propertyID": "Another one without group_id property", + "propertyID": "This is a custom list input", "valueReference": "select", "value": "Some choice", - "description": "this element has no group property defined" - }, - { - "@type": "PropertyValue", - "propertyID": "Has group_id that is not in elabftw.groups", - "valueReference": "text", - "value": "I am lost!" - } - ] - }, - { - "@id": "./Production - Omnis-non-est-unde-excepturi-maxime - f04d5cb3/perferendisdolores.json", - "@type": "File", - "name": "perferendisdolores.json", - "alternateName": "7b/7b3f5b11df2c91f52d58699afa3f5de45e93dbd270fbddd961cd07d809dc84b721cb50f994f075dbdf3c4b6309967c36c6af7083d1be11bc54b239c8d92e2260.json", - "contentSize": 21, - "sha256": "66bd0965616378a8b4698bf8b01784e7d29f15c7bde4fe86fb4f5dc959cf189c" - }, - { - "@id": "#category-Production", - "@type": "Thing", - "name": "Production" - }, - { - "@id": "./Production - Omnis-non-est-unde-excepturi-maxime - f04d5cb3/", - "@type": "Dataset", - "author": { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256" - }, - "dateCreated": "2024-06-17T20:04:47+02:00", - "dateModified": "2024-06-17T20:04:47+02:00", - "name": "Omnis non est unde excepturi maxime.", - "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=204", - "genre": "experiment", - "creativeWorkStatus": "Running", - "hasPart": [ - { - "@id": "./Production - Omnis-non-est-unde-excepturi-maxime - f04d5cb3/perferendisdolores.json" + "description": "The value is selected from a pre-defined list" } ], - "identifier": "20240617-f04d5cb3c49de50dba654e3627a6bf2b9e3b35a1", - "keywords": "protein purification,FLIM,nanotechnology,research methodology,Open Source,molecular cloning", - "text": "Alice, that she wanted much to know, but the three gardeners, oblong and flat, with their hands and feet at the sides of it, and found that, as nearly as large as himself, and this Alice would not give all else for two reasons. First, because I'm on the bank, with her head!' about once in the world! Oh, my dear Dinah! I wonder if I know is, it would be offended again. 'Mine is a raven like a stalk out of this remark, and thought to herself. At this the whole place around her became alive with the Duchess, the Duchess! Oh! won't she be savage if I've been changed for any lesson-books!' And so it was YOUR table,' said Alice; 'it's laid for a minute, trying to explain the mistake it had grown so large in the world you fly, Like a tea-tray in the air: it puzzled her too much, so she set to work very carefully, remarking, 'I really must be getting home; the night-air doesn't suit my throat!' and a Dodo, a Lory and an Eaglet, and several other curious creatures. Alice led the way, and the.", - "about": { - "@id": "#category-Production" + "aggregateRating": { + "@type": "AggregateRating", + "ratingValue": 5, + "reviewCount": 1 } }, { - "@id": "#category-Support ticket", + "@id": "#category-Project CASIMIR", "@type": "Thing", - "name": "Support ticket" + "name": "Project CASIMIR", + "color": "82e49d" }, { - "@id": "./Support-ticket - Nisi-voluptatem-placeat-repudiandae-et-provident - a58088c7/", + "@id": "./Project-CASIMIR - Synthesis-of-Aspirin - 6179cb6a/", "@type": "Dataset", "author": { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:04:46+02:00", - "dateModified": "2024-06-17T20:04:47+02:00", - "name": "Nisi voluptatem placeat repudiandae et provident.", + "dateCreated": "2024-11-17T03:02:01+01:00", + "dateModified": "2024-11-17T15:10:35+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "Synthesis of Aspirin", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=203", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=262", "genre": "experiment", "creativeWorkStatus": "Success", - "identifier": "20240617-a58088c77e6a1490e844f081da399877e1cc99e9", - "keywords": "protein purification,SCP-2702,scientific discovery", - "text": "Gryphon answered, very nearly in the middle. Alice kept her eyes filled with cupboards and book-shelves; here and there she saw in my size; and as he could think of nothing else to say but 'It belongs to a shriek, 'and just as she couldn't answer either question, it didn't much matter which way she put her hand again, and put it more clearly,' Alice replied eagerly, for she felt that she still held the pieces of mushroom in her own children. 'How should I know?' said Alice, who was passing at the Duchess sang the second verse of the singers in the distance, screaming with passion. She had not the smallest notice of them even when they arrived, with a little of her own courage. 'It's no business of MINE.' The Queen had ordered. They very soon finished off the fire, stirring a large crowd collected round it: there was a child,' said the Dormouse, who seemed ready to talk to.' 'How are you getting on?' said Alice, rather doubtfully, as she spoke. 'I must go by the carrier,' she thought.", + "identifier": "20241117-6179cb6a0c1f49df77c0b1c3e3663ff082d24edb", + "keywords": "chemistry,has-mathjax", + "text": "\nAspirin is a widely used pain-relieving and anti-inflammatory drug. In this experiment, we aimed to synthesize aspirin from salicylic acid and acetic anhydride.\n
\n\nWe mixed salicylic acid and acetic anhydride in the presence of a catalyst, sulfuric acid. The reaction produced aspirin and acetic acid, as shown in the following chemical equation:\n
\n\n$$\\ce{C7H6O3 + (CH3CO)2O ->[\\text{H2SO4}] C9H8O4 + CH3COOH}$$\n
\n\nAfter the reaction, we purified the aspirin by recrystallization from hot water. The purity of the aspirin was confirmed using thin-layer chromatography (TLC) and melting point analysis.\n
\n\nThe yield of aspirin was 80% based on the amount of salicylic acid used. The purity of the aspirin was confirmed using TLC, which showed a single spot corresponding to aspirin. The melting point of the aspirin was 135-136\u00b0C, which is consistent with the literature value of 135-136.5\u00b0C.\n
\n\nThe chemical reaction involved in the synthesis of aspirin can be written as:\n
\n\n$$\\ce{C7H6O3 + (CH3CO)2O ->[\\text{H2SO4}] C9H8O4 + CH3COOH}$$\n
\n\nThe theoretical yield of aspirin can be calculated using the stoichiometry of the reaction. Assuming that all the salicylic acid reacts and no aspirin is lost during the purification process, the theoretical yield is calculated as follows:\n
\n\n$$\\text{Theoretical yield} = \\frac{\\text{moles of salicylic acid used}}{\\text{molar ratio of salicylic acid to aspirin}} \\times \\text{molar mass of aspirin}$$\n
\n\nThe actual yield of aspirin can be calculated by dividing the mass of the purified aspirin by the mass of salicylic acid used and multiplying by 100%. The percent yield can be calculated by dividing the actual yield by the theoretical yield and multiplying by 100%.\n
\n", "about": { - "@id": "#category-Support ticket" - } + "@id": "#category-Project CASIMIR" + }, + "variableMeasured": null }, { - "@id": "./Tests - Et-ea-sapiente-officiis-hic-libero - a6c65a6d/", + "@id": "./Project-CRYPTO-COOL - Testing-relationship-between-acceleration-and-gravity - 57999445/", "@type": "Dataset", "author": { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:04:46+02:00", - "dateModified": "2024-06-17T20:04:46+02:00", - "name": "Et ea sapiente officiis hic libero.", + "dateCreated": "2024-11-17T03:02:00+01:00", + "dateModified": "2024-11-17T03:02:00+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "Testing relationship between acceleration and gravity", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=202", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=261", "genre": "experiment", - "creativeWorkStatus": "Running", - "identifier": "20240617-a6c65a6dd1f4afd22dabe3e79b382fe0246b2e30", - "keywords": "ethics in research,scientific literature,FRET,lab techniques,gene expression", - "text": "White Rabbit with pink eyes ran close by it, and they sat down, and the pool of tears which she had hoped) a fan and gloves. 'How queer it seems,' Alice said to herself, for she thought, 'till its ears have come, or at least one of the evening, beautiful Soup! Soup of the way--' 'THAT generally takes some time,' interrupted the Hatter: 'it's very easy to know what \"it\" means well enough, when I get it home?' when it had fallen into the air, I'm afraid, sir' said Alice, timidly; 'some of the month is it?' Alice panted as she could. 'The game's going on between the executioner, the King, rubbing his hands; 'so now let the Dormouse began in a louder tone. 'ARE you to death.\"' 'You are old,' said the Cat, as soon as she listened, or seemed to listen, the whole cause, and condemn you to death.\"' 'You are old,' said the Queen. 'Their heads are gone, if it had some kind of authority among them, called out, 'Sit down, all of you, and listen to her, though, as they all crowded together at one." + "creativeWorkStatus": "Success", + "identifier": "20241117-5799944529c420616b467bb89feeec6205efb827", + "keywords": "has-mathjax,physics", + "text": "\nThe acceleration due to gravity is a fundamental constant that determines the gravitational force between two objects. In this experiment, we aimed to determine the value of acceleration due to gravity using a simple pendulum.\n
\n\nWe suspended a metal ball from a string and measured the time taken for one complete oscillation of the pendulum. We repeated this measurement for different lengths of the pendulum and recorded the corresponding times. Using the formula $T=2\\pi\\sqrt{\\frac{L}{g}}$, where $T$ is the period of the pendulum, $L$ is the length of the pendulum, and $g$ is the acceleration due to gravity, we calculated the value of $g$. The period $T$ can also be expressed in terms of the frequency $f$ using the equation $T=\\frac{1}{f}$.\n
\n\nThe results showed that the value of acceleration due to gravity was $9.81 \\text{ m/s}^2$, which is consistent with the accepted value. We also found that the period of the pendulum increased with increasing length, as predicted by the formula $T=2\\pi\\sqrt{\\frac{L}{g}}$. The relationship between the length and period of the pendulum can be expressed as $T^2=\\frac{4\\pi^2}{g}L$, which is a linear relationship with a slope of $\\frac{4\\pi^2}{g}$.\n
\n", + "about": { + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": null }, { - "@id": "#category-Discussions", + "@id": "#category-Tests", "@type": "Thing", - "name": "Discussions" + "name": "Tests", + "color": "2a8ab3" }, { - "@id": "./Discussions - Numquam-alias-repellendus-corporis - 2c266830/", + "@id": "./Tests - Effect-of-temperature-on-enzyme-activity - ef2b8e07/", "@type": "Dataset", "author": { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256" + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:04:46+02:00", - "dateModified": "2024-06-17T20:04:46+02:00", - "name": "Numquam alias repellendus corporis.", + "dateCreated": "2024-11-17T03:02:00+01:00", + "dateModified": "2024-11-17T15:10:40+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "Effect of temperature on enzyme activity", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=201", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=260", "genre": "experiment", "creativeWorkStatus": "Need to be redone", - "identifier": "20240617-2c266830fb2cc554ccad45820e13e9adc3b447fe", - "keywords": "PCR", - "text": "King had said that day. 'A likely story indeed!' said the Mouse, in a tone of delight, which changed into alarm in another moment that it is!' As she said to herself, and shouted out, 'You'd better not do that again!' which produced another dead silence. 'It's a mineral, I THINK,' said Alice. The King looked anxiously at the window.' 'THAT you won't' thought Alice, 'as all the party sat silent for a long breath, and said nothing. 'This here young lady,' said the Hatter, with an M--' 'Why with an M, such as mouse-traps, and the game began. Alice thought to herself, as she stood still where she was, and waited. When the sands are all pardoned.' 'Come, THAT'S a good many little girls of her head impatiently; and, turning to the Knave. The Knave did so, and giving it something out of its mouth and began picking them up again with a trumpet in one hand and a fan! Quick, now!' And Alice was only a child!' The Queen turned crimson with fury, and, after waiting till she heard a voice of the.", + "identifier": "20241117-ef2b8e072da876b38cf252fa619af0b29e818631", + "keywords": "enzymology,test,Project ENZYTEMP", + "text": "\nEnzymes are biological molecules that catalyze chemical reactions in living organisms. In this experiment, we investigated the effect of temperature on the activity of the enzyme amylase, which catalyzes the hydrolysis of starch into glucose.\n
\n\nWe prepared a solution of starch and added a small amount of amylase to the solution. We then incubated the solution at different temperatures, ranging from 4\u00b0C to 70\u00b0C, for 5 minutes. After the incubation period, we added iodine to the solution to detect the presence of starch. The disappearance of the blue-black color of the iodine indicated the breakdown of starch into glucose.\n
\n\nThe results showed that the activity of amylase increased with increasing temperature up to 37\u00b0C, which is the optimum temperature for amylase activity. At temperatures above 37\u00b0C, the activity of amylase decreased rapidly, and at 70\u00b0C, the enzyme was completely denatured and lost its catalytic activity.\n
\n\nThe relationship between temperature and enzyme activity can be described by the Arrhenius equation, which relates the rate constant of a reaction to the activation energy and temperature. The equation can be written as:\n
\n\n$$k = Ae^{-E_a/RT}$$\n
\n\nwhere k is the rate constant, A is the pre-exponential factor, E_a is the activation energy, R is the gas constant, and T is the absolute temperature. The activation energy is the energy required to break the bonds in the reactants and form the products. The rate constant increases with increasing temperature due to the increase in the number of reactant molecules with sufficient kinetic energy to overcome the activation energy barrier.\n
\n\nThe effect of temperature on enzyme activity can also be described by the Q10 value, which is the ratio of the reaction rate at a given temperature to the reaction rate at a temperature 10\u00b0C lower. The Q10 value for most enzyme-catalyzed reactions is around 2-3, indicating that the reaction rate doubles or triples with each 10\u00b0C increase in temperature.\n
\n", "about": { - "@id": "#category-Discussions" - } + "@id": "#category-Tests" + }, + "variableMeasured": null }, { - "@id": "./Demo - Officiis-consequatur-vel-ut-nihil-sit-ut - 350a45f5/", + "@id": "./Project-CRYPTO-COOL - \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76 - aaae41a1/", "@type": "Dataset", "author": { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256" + "@id": "person://c8bc7d581ea61b54c0a608a683b080162a45e6391e157c71fd0c38fe9a57ff2f?hash_algo=sha256" }, - "dateCreated": "2024-06-17T20:04:45+02:00", - "dateModified": "2024-06-17T20:04:46+02:00", - "name": "Officiis consequatur vel ut nihil sit ut.", + "dateCreated": "2024-11-17T03:01:59+01:00", + "dateModified": "2024-11-17T03:02:00+01:00", + "temporal": "2025-01-02T00:00:00+01:00", + "name": "\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76", "encodingFormat": "text/html", - "url": "https://elab.local:3148/experiments.php?mode=view&id=200", + "url": "https://demo.elabftw.net/experiments.php.php?mode=view&id=259", "genre": "experiment", - "creativeWorkStatus": "Need to be redone", - "identifier": "20240617-350a45f500942a89fd4a969595be43b185074f2e", - "keywords": "DNA sequencing,Secret,ecology,Copper", - "text": "Alice, swallowing down her flamingo, and began talking to herself, 'Which way? Which way?', holding her hand in hand, in couples: they were playing the Queen jumped up on tiptoe, and peeped over the verses the White Rabbit, jumping up in such a pleasant temper, and thought it would,' said the White Rabbit blew three blasts on the stairs. Alice knew it was sneezing on the OUTSIDE.' He unfolded the paper as he shook both his shoes off. 'Give your evidence,' said the Queen, but she thought it would,' said the Cat, 'if you don't even know what it was: at first she thought it would like the look of things at all, as the Lory positively refused to tell them something more. 'You promised to tell him. 'A nice muddle their slates'll be in Bill's place for a minute or two, they began moving about again, and Alice called out 'The race is over!' and they sat down and cried. 'Come, there's half my plan done now! How puzzling all these changes are! I'm never sure what I'm going to do with you.", - "step": [ - { - "@type": "HowToStep", - "position": 1, - "creativeWorkStatus": "unfinished", - "itemListElement": [ - { - "@type": "HowToDirection", - "text": "evenietlabore" - } - ] - }, - { - "@type": "HowToStep", - "position": 2, - "creativeWorkStatus": "unfinished", - "itemListElement": [ - { - "@type": "HowToDirection", - "text": "etet" - } - ] - } - ] + "creativeWorkStatus": "Success", + "identifier": "20241117-aaae41a1bc8fd66ca3a829dcd5b2429ca9fd62b4", + "keywords": "CJK,\u30b7\u30e7\u30a6\u30b8\u30e7\u30a6\u30d0\u30a8", + "text": "\u80cc\u666f\uff1a \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306f\u3001\u679c\u7269\u306e\u6210\u719f\u904e\u7a0b\u306b\u5927\u304d\u306a\u5f71\u97ff\u3092\u4e0e\u3048\u307e\u3059\u3002\u305d\u306e\u305f\u3081\u3001\u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u3064\u3044\u3066\u7814\u7a76\u3059\u308b\u3053\u3068\u306f\u3001\u679c\u7269\u7523\u696d\u306b\u3068\u3063\u3066\u91cd\u8981\u306a\u610f\u7fa9\u3092\u6301\u3061\u307e\u3059\u3002
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\n", + "about": { + "@id": "#category-Project CRYPTO-COOL" + }, + "variableMeasured": null }, { "@id": "./", - "@type": [ - "Dataset" - ], + "identifier": "c27e24b3-ea46-4378-b40b-e9a1868b8c67", + "@type": "Dataset", + "datePublished": "2024-11-17T15:10:44+01:00", "hasPart": [ { - "@id": "./RD - Testing-relationship-between-acceleration-and-gravity - 5adb0eb3/" - }, - { - "@id": "./Demo - Synthesis-of-Aspirin - 6bc46aec/" - }, - { - "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 8ebcfca1/" - }, - { - "@id": "./Project-CRYPTO-COOL - Gold-master-experiment - df81f900/" - }, - { - "@id": "./Tests - Numquam-delectus-sint-quis-sint-cupiditate-non-voluptatem - 10df895d/" - }, - { - "@id": "./Generated - Architecto-est-recusandae-tempora-facilis-nemo - 67d460ac/" - }, - { - "@id": "./Generated - Minus-qui-dolorem-praesentium-quos-aliquam-quia-ea - 18fd5717/" - }, - { - "@id": "./Project-CRYPTO-COOL - Effect-of-temperature-on-enzyme-activity - d938ab84/" - }, - { - "@id": "./Project-CRYPTO-COOL - \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76 - f44d2c0b/" + "@id": "./Project-CRYPTO-COOL - Testing-the-eLabFTW-lab-notebook - 62e3c0a3/" }, { - "@id": "./Project-CRYPTO-COOL - Synthesis-and-Characterization-of-a-Novel-Organic-Compound-with-Antimicrobial- - 412e346f/" + "@id": "./Project-CRYPTO-COOL - An-example-experiment - 7c69b55a/" }, { - "@id": "./Project-CRYPTO-COOL - Transfection-of-p103\u039412-22-into-RPE-1-Actin-RFP - 4b08c8b1/" + "@id": "./Project-CRYPTO-COOL - Synthesis-and-Characterization-of-a-Novel-Organic-Compound-with-Antimicrobial- - c686e77b/" }, { - "@id": "./Project-CRYPTO-COOL - An-example-experiment - 4ae900b8/" + "@id": "./Default - Ducimus-dolores-deserunt-beatae-aut-odit-vel - 27800bd8/" }, { - "@id": "./Project-CRYPTO-COOL - Test-the-grouped-extra-fields - 4220974c/" + "@id": "./Project-CRYPTO-COOL - Transfection-of-p103\u039412-22-into-RPE-1-Actin-RFP - fcab150c/" }, { - "@id": "./Production - Omnis-non-est-unde-excepturi-maxime - f04d5cb3/" + "@id": "./Default - Distinctio-consectetur-vero-quisquam-impedit - 36d0f66b/" }, { - "@id": "./Support-ticket - Nisi-voluptatem-placeat-repudiandae-et-provident - a58088c7/" + "@id": "./Project-CASIMIR - Synthesis-of-Aspirin - 6179cb6a/" }, { - "@id": "./Tests - Et-ea-sapiente-officiis-hic-libero - a6c65a6d/" + "@id": "./Project-CRYPTO-COOL - Testing-relationship-between-acceleration-and-gravity - 57999445/" }, { - "@id": "./Discussions - Numquam-alias-repellendus-corporis - 2c266830/" + "@id": "./Tests - Effect-of-temperature-on-enzyme-activity - ef2b8e07/" }, { - "@id": "./Demo - Officiis-consequatur-vel-ut-nihil-sit-ut - 350a45f5/" + "@id": "./Project-CRYPTO-COOL - \u30d5\u30eb\u30fc\u30c4\u30d5\u30e9\u30a4\u306e\u98df\u6027\u306b\u95a2\u3059\u308b\u7814\u7a76 - aaae41a1/" } - ] - }, - { - "@id": "person://42c713981f75caa8c9d8e3a60c883dc4788c0563de13ba5607a12f385fe534fe?hash_algo=sha256", - "@type": "Person", - "givenName": "Toto", - "familyName": "Le sysadmin", - "email": "toto@yopmail.com" - }, - { - "@id": "person://ec7c1f6cde2fe4f2edab2ef88546f997f5f9c2328c4bbd4de99309f49b0161f7?hash_algo=sha256", - "@type": "Person", - "givenName": "Viola", - "familyName": "Gleichner", - "email": "tutu@yopmail.com" + ], + "name": "eLabFTW export", + "description": "This is a .eln export from eLabFTW", + "license": { + "@id": "https://creativecommons.org/licenses/by-nc-sa/4.0/" + } }, { - "@id": "person://b344adffee437ab4a11d1c722fd096492f586b0d47854a3761efb68647b7b84c?hash_algo=sha256", + "@id": "person://ea073eacfa5790381567e321ab1b1b245c0661a38830c3327dedb1b61dec498e?hash_algo=sha256", "@type": "Person", - "givenName": "Presley", - "familyName": "Little", - "email": "titi@yopmail.com" + "givenName": "Alf", + "familyName": "Stoltenberg", + "email": "demo@deltablot.email" }, { - "@id": "person://2b546e5b308a748ee7ef1758bb44edfd4054b73f4a0f0189ef90604c13f7230e?hash_algo=sha256", + "@id": "person://c8bc7d581ea61b54c0a608a683b080162a45e6391e157c71fd0c38fe9a57ff2f?hash_algo=sha256", "@type": "Person", - "givenName": "Josephine", - "familyName": "Reichert", - "email": "demo@elabftw.net" + "givenName": "Nicolas", + "familyName": "CARPi", + "email": "nico@deltablot.email" } ] } diff --git a/examples/elabftw/README_template.md b/examples/elabftw/README_template.md index a382fec..d086980 100644 --- a/examples/elabftw/README_template.md +++ b/examples/elabftw/README_template.md @@ -5,6 +5,8 @@ * Repo: https://github.com/elabftw/elabftw * Chat: https://gitter.im/elabftw/elabftw +You can generate .eln files from the demo: https://demo.elabftw.net. Select a few entries and export as .eln from the top menu. Or go to the Import section and do a full export. + ## Concepts used Here is a correspondance between concepts in eLabFTW and how they are translated in the metadata json file in the archive: diff --git a/examples/elabftw/export.eln b/examples/elabftw/export.eln index fcecc24..2bb9609 100644 Binary files a/examples/elabftw/export.eln and b/examples/elabftw/export.eln differ