Fix failing test with ColumnCombine Adapter (#303) #1375
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies and run tests on | |
| # windows and linux systems with a variety of Python versions | |
| # For more information see: | |
| # https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Automated Tests | |
| on: | |
| push: | |
| pull_request: | |
| workflow_dispatch: | |
| schedule: # only upstream, won't trigger on forks! | |
| - cron: '0 0 * * *' # daily | |
| jobs: | |
| build: | |
| strategy: | |
| matrix: | |
| python-version: [ '3.8', '3.9', '3.10' ] | |
| os: ["ubuntu-latest", "windows-latest"] | |
| ymlfile: ["environment.yml"] | |
| name: Py${{ matrix.python-version }}@${{ matrix.os }}🐍 | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: true # does not work with self-hosted testdata | |
| fetch-depth: 0 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: "latest" | |
| channel-priority: flexible | |
| python-version: ${{ matrix.python-version }} | |
| environment-file: ${{ matrix.ymlfile }} | |
| activate-environment: pytesmo # todo: must match with name in environment.yml | |
| auto-activate-base: false | |
| - name: Print Infos | |
| shell: bash -l {0} | |
| run: | | |
| git status | |
| conda info -a | |
| conda list | |
| pip list | |
| which pip | |
| which python | |
| - name: Export Environment | |
| shell: bash -l {0} | |
| run: | | |
| mkdir -p .artifacts | |
| # Here we could exclude pinned environments (not used): | |
| if [ ${{ matrix.ymlfile }} == "environment.yml" ] | |
| then | |
| filename=env_py${{ matrix.python-version }}_${{ matrix.os }}.yml | |
| conda env export --no-builds | grep -v "prefix" > .artifacts/$filename | |
| fi | |
| - name: Install package and test | |
| shell: bash -l {0} | |
| run: | | |
| pip install -e .[testing] | |
| pytest --cache-clear | |
| - name: Upload Coverage | |
| shell: bash -l {0} | |
| run: | | |
| pip install coveralls && coveralls --service=github | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_FLAG_NAME: ${{ matrix.python-version }} | |
| COVERALLS_PARALLEL: true | |
| - name: Create wheel and dist package | |
| shell: bash -l {0} | |
| run: | | |
| git status | |
| pip install setuptools_scm | |
| if [ ${{ matrix.os }} == "windows-latest" ] | |
| then | |
| # build whls on windows | |
| pip install wheel | |
| python setup.py bdist_wheel --dist-dir .artifacts/dist | |
| else | |
| # build dist on linux | |
| python setup.py sdist --dist-dir .artifacts/dist | |
| fi | |
| ls .artifacts/dist | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: Artifacts | |
| path: .artifacts/* | |
| coveralls: | |
| name: Submit Coveralls 👚 | |
| needs: build | |
| runs-on: ubuntu-latest | |
| container: python:3-slim | |
| steps: | |
| - name: Finished | |
| run: | | |
| pip3 install --upgrade coveralls && coveralls --service=github --finish | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| publish: | |
| name: Upload to PyPI | |
| if: | | |
| startsWith(github.ref, 'refs/tags/v') && | |
| startsWith(github.repository, 'TUW-GEO') | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Print environment variables | |
| run: | | |
| echo "GITHUB_REF = $GITHUB_REF" | |
| echo "GITHUB_REPOSITORY = $GITHUB_REPOSITORY" | |
| - name: Download Artifacts | |
| uses: actions/download-artifact@v2 | |
| - name: Display downloaded files | |
| run: ls -aR | |
| - name: Upload to PyPI | |
| uses: pypa/[email protected] | |
| with: | |
| skip_existing: true | |
| verbose: true | |
| verify_metadata: true | |
| packages_dir: Artifacts/dist/ | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} # this needs to be uploaded to github actions secrets |