From 47fdeba747c8ffde1d37726723de57f48616ba40 Mon Sep 17 00:00:00 2001 From: GitHub Action Date: Tue, 14 Nov 2023 22:00:30 +0000 Subject: [PATCH] Update documentation --- _modules/xfaster/xfaster_exec.html | 1 + notebooks/XFaster_Tutorial.html | 4 +- notebooks/XFaster_Tutorial.ipynb | 316 ++++++++++++++--------------- searchindex.js | 2 +- 4 files changed, 162 insertions(+), 161 deletions(-) diff --git a/_modules/xfaster/xfaster_exec.html b/_modules/xfaster/xfaster_exec.html index 46100cf5..7a9e5703 100644 --- a/_modules/xfaster/xfaster_exec.html +++ b/_modules/xfaster/xfaster_exec.html @@ -625,6 +625,7 @@

Source code for xfaster.xfaster_exec

     )
     config_vars.update(common_opts, "XFaster Common")
     common_opts.pop("config")
+    common_opts.pop("dump_state")
 
     # initialize class
     X = xfc.XFaster(config, **common_opts)
diff --git a/notebooks/XFaster_Tutorial.html b/notebooks/XFaster_Tutorial.html
index 8079e0f8..0030e461 100644
--- a/notebooks/XFaster_Tutorial.html
+++ b/notebooks/XFaster_Tutorial.html
@@ -1379,7 +1379,7 @@ 

Looking at results
-<matplotlib.colorbar.Colorbar at 0x7f07018ddee0>
+<matplotlib.colorbar.Colorbar at 0x7fabf687ddc0>
 

@@ -1474,7 +1474,7 @@

get_likelihood
-[ 2023-11-14 21:29:13UTC ] INFO: Computing brute-force r profile likelihood
+[ 2023-11-14 22:00:17UTC ] INFO: Computing brute-force r profile likelihood
 

diff --git a/notebooks/XFaster_Tutorial.ipynb b/notebooks/XFaster_Tutorial.ipynb index 5d0792c2..76416df6 100644 --- a/notebooks/XFaster_Tutorial.ipynb +++ b/notebooks/XFaster_Tutorial.ipynb @@ -246,10 +246,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:47.665189Z", - "iopub.status.busy": "2023-11-14T21:28:47.664897Z", - "iopub.status.idle": "2023-11-14T21:28:48.459498Z", - "shell.execute_reply": "2023-11-14T21:28:48.458805Z" + "iopub.execute_input": "2023-11-14T21:59:38.653578Z", + "iopub.status.busy": "2023-11-14T21:59:38.653074Z", + "iopub.status.idle": "2023-11-14T21:59:39.713986Z", + "shell.execute_reply": "2023-11-14T21:59:39.713006Z" } }, "outputs": [], @@ -265,10 +265,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.463081Z", - "iopub.status.busy": "2023-11-14T21:28:48.462526Z", - "iopub.status.idle": "2023-11-14T21:28:48.467758Z", - "shell.execute_reply": "2023-11-14T21:28:48.467118Z" + "iopub.execute_input": "2023-11-14T21:59:39.718768Z", + "iopub.status.busy": "2023-11-14T21:59:39.718008Z", + "iopub.status.idle": "2023-11-14T21:59:39.726862Z", + "shell.execute_reply": "2023-11-14T21:59:39.725868Z" } }, "outputs": [], @@ -325,10 +325,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.470638Z", - "iopub.status.busy": "2023-11-14T21:28:48.470204Z", - "iopub.status.idle": "2023-11-14T21:28:48.473320Z", - "shell.execute_reply": "2023-11-14T21:28:48.472695Z" + "iopub.execute_input": "2023-11-14T21:59:39.731017Z", + "iopub.status.busy": "2023-11-14T21:59:39.730169Z", + "iopub.status.idle": "2023-11-14T21:59:39.734166Z", + "shell.execute_reply": "2023-11-14T21:59:39.733352Z" } }, "outputs": [], @@ -344,10 +344,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.475963Z", - "iopub.status.busy": "2023-11-14T21:28:48.475475Z", - "iopub.status.idle": "2023-11-14T21:28:48.482100Z", - "shell.execute_reply": "2023-11-14T21:28:48.481566Z" + "iopub.execute_input": "2023-11-14T21:59:39.738382Z", + "iopub.status.busy": "2023-11-14T21:59:39.737661Z", + "iopub.status.idle": "2023-11-14T21:59:39.749578Z", + "shell.execute_reply": "2023-11-14T21:59:39.748839Z" } }, "outputs": [], @@ -360,10 +360,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.484478Z", - "iopub.status.busy": "2023-11-14T21:28:48.484290Z", - "iopub.status.idle": "2023-11-14T21:28:48.490596Z", - "shell.execute_reply": "2023-11-14T21:28:48.489918Z" + "iopub.execute_input": "2023-11-14T21:59:39.753237Z", + "iopub.status.busy": "2023-11-14T21:59:39.752497Z", + "iopub.status.idle": "2023-11-14T21:59:39.766440Z", + "shell.execute_reply": "2023-11-14T21:59:39.765765Z" } }, "outputs": [ @@ -394,10 +394,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.523100Z", - "iopub.status.busy": "2023-11-14T21:28:48.522628Z", - "iopub.status.idle": "2023-11-14T21:28:48.527098Z", - "shell.execute_reply": "2023-11-14T21:28:48.526437Z" + "iopub.execute_input": "2023-11-14T21:59:39.809384Z", + "iopub.status.busy": "2023-11-14T21:59:39.808871Z", + "iopub.status.idle": "2023-11-14T21:59:39.813858Z", + "shell.execute_reply": "2023-11-14T21:59:39.813228Z" } }, "outputs": [ @@ -435,10 +435,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.529720Z", - "iopub.status.busy": "2023-11-14T21:28:48.529340Z", - "iopub.status.idle": "2023-11-14T21:28:48.533836Z", - "shell.execute_reply": "2023-11-14T21:28:48.533179Z" + "iopub.execute_input": "2023-11-14T21:59:39.817082Z", + "iopub.status.busy": "2023-11-14T21:59:39.816556Z", + "iopub.status.idle": "2023-11-14T21:59:39.821420Z", + "shell.execute_reply": "2023-11-14T21:59:39.820623Z" } }, "outputs": [], @@ -452,10 +452,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.536473Z", - "iopub.status.busy": "2023-11-14T21:28:48.536065Z", - "iopub.status.idle": "2023-11-14T21:28:48.540110Z", - "shell.execute_reply": "2023-11-14T21:28:48.539506Z" + "iopub.execute_input": "2023-11-14T21:59:39.824720Z", + "iopub.status.busy": "2023-11-14T21:59:39.824292Z", + "iopub.status.idle": "2023-11-14T21:59:39.828671Z", + "shell.execute_reply": "2023-11-14T21:59:39.828060Z" } }, "outputs": [ @@ -479,10 +479,10 @@ "execution_count": 9, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.542719Z", - "iopub.status.busy": "2023-11-14T21:28:48.542177Z", - "iopub.status.idle": "2023-11-14T21:28:48.547187Z", - "shell.execute_reply": "2023-11-14T21:28:48.546530Z" + "iopub.execute_input": "2023-11-14T21:59:39.832273Z", + "iopub.status.busy": "2023-11-14T21:59:39.831578Z", + "iopub.status.idle": "2023-11-14T21:59:39.838300Z", + "shell.execute_reply": "2023-11-14T21:59:39.837584Z" } }, "outputs": [ @@ -554,10 +554,10 @@ "execution_count": 10, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.550029Z", - "iopub.status.busy": "2023-11-14T21:28:48.549820Z", - "iopub.status.idle": "2023-11-14T21:28:48.557211Z", - "shell.execute_reply": "2023-11-14T21:28:48.556580Z" + "iopub.execute_input": "2023-11-14T21:59:39.842125Z", + "iopub.status.busy": "2023-11-14T21:59:39.841451Z", + "iopub.status.idle": "2023-11-14T21:59:39.851615Z", + "shell.execute_reply": "2023-11-14T21:59:39.850319Z" } }, "outputs": [], @@ -570,10 +570,10 @@ "execution_count": 11, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.559873Z", - "iopub.status.busy": "2023-11-14T21:28:48.559488Z", - "iopub.status.idle": "2023-11-14T21:28:48.563708Z", - "shell.execute_reply": "2023-11-14T21:28:48.563133Z" + "iopub.execute_input": "2023-11-14T21:59:39.854902Z", + "iopub.status.busy": "2023-11-14T21:59:39.854431Z", + "iopub.status.idle": "2023-11-14T21:59:39.858991Z", + "shell.execute_reply": "2023-11-14T21:59:39.858284Z" } }, "outputs": [ @@ -606,10 +606,10 @@ "execution_count": 12, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.566277Z", - "iopub.status.busy": "2023-11-14T21:28:48.565827Z", - "iopub.status.idle": "2023-11-14T21:28:48.795597Z", - "shell.execute_reply": "2023-11-14T21:28:48.794882Z" + "iopub.execute_input": "2023-11-14T21:59:39.862313Z", + "iopub.status.busy": "2023-11-14T21:59:39.862039Z", + "iopub.status.idle": "2023-11-14T21:59:40.131529Z", + "shell.execute_reply": "2023-11-14T21:59:40.130193Z" } }, "outputs": [ @@ -675,10 +675,10 @@ "execution_count": 13, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:48.798756Z", - "iopub.status.busy": "2023-11-14T21:28:48.798259Z", - "iopub.status.idle": "2023-11-14T21:28:49.071682Z", - "shell.execute_reply": "2023-11-14T21:28:49.070998Z" + "iopub.execute_input": "2023-11-14T21:59:40.135945Z", + "iopub.status.busy": "2023-11-14T21:59:40.135332Z", + "iopub.status.idle": "2023-11-14T21:59:40.504685Z", + "shell.execute_reply": "2023-11-14T21:59:40.503578Z" } }, "outputs": [ @@ -700,10 +700,10 @@ "execution_count": 14, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:49.074256Z", - "iopub.status.busy": "2023-11-14T21:28:49.074047Z", - "iopub.status.idle": "2023-11-14T21:28:50.168593Z", - "shell.execute_reply": "2023-11-14T21:28:50.167823Z" + "iopub.execute_input": "2023-11-14T21:59:40.508916Z", + "iopub.status.busy": "2023-11-14T21:59:40.508412Z", + "iopub.status.idle": "2023-11-14T21:59:41.858673Z", + "shell.execute_reply": "2023-11-14T21:59:41.857848Z" } }, "outputs": [ @@ -775,10 +775,10 @@ "execution_count": 15, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:50.171965Z", - "iopub.status.busy": "2023-11-14T21:28:50.171555Z", - "iopub.status.idle": "2023-11-14T21:28:50.747586Z", - "shell.execute_reply": "2023-11-14T21:28:50.746829Z" + "iopub.execute_input": "2023-11-14T21:59:41.862499Z", + "iopub.status.busy": "2023-11-14T21:59:41.861959Z", + "iopub.status.idle": "2023-11-14T21:59:42.545723Z", + "shell.execute_reply": "2023-11-14T21:59:42.544137Z" } }, "outputs": [ @@ -824,10 +824,10 @@ "execution_count": 16, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:50.750334Z", - "iopub.status.busy": "2023-11-14T21:28:50.750111Z", - "iopub.status.idle": "2023-11-14T21:28:51.096464Z", - "shell.execute_reply": "2023-11-14T21:28:51.095678Z" + "iopub.execute_input": "2023-11-14T21:59:42.550279Z", + "iopub.status.busy": "2023-11-14T21:59:42.549614Z", + "iopub.status.idle": "2023-11-14T21:59:43.014933Z", + "shell.execute_reply": "2023-11-14T21:59:43.014049Z" } }, "outputs": [ @@ -884,10 +884,10 @@ "execution_count": 17, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:51.099186Z", - "iopub.status.busy": "2023-11-14T21:28:51.098945Z", - "iopub.status.idle": "2023-11-14T21:28:51.462046Z", - "shell.execute_reply": "2023-11-14T21:28:51.461292Z" + "iopub.execute_input": "2023-11-14T21:59:43.019076Z", + "iopub.status.busy": "2023-11-14T21:59:43.018524Z", + "iopub.status.idle": "2023-11-14T21:59:43.482945Z", + "shell.execute_reply": "2023-11-14T21:59:43.482112Z" } }, "outputs": [ @@ -958,10 +958,10 @@ "execution_count": 18, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:51.464867Z", - "iopub.status.busy": "2023-11-14T21:28:51.464461Z", - "iopub.status.idle": "2023-11-14T21:28:51.469726Z", - "shell.execute_reply": "2023-11-14T21:28:51.469071Z" + "iopub.execute_input": "2023-11-14T21:59:43.487466Z", + "iopub.status.busy": "2023-11-14T21:59:43.486609Z", + "iopub.status.idle": "2023-11-14T21:59:43.493804Z", + "shell.execute_reply": "2023-11-14T21:59:43.493051Z" } }, "outputs": [ @@ -990,10 +990,10 @@ "execution_count": 19, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:51.472551Z", - "iopub.status.busy": "2023-11-14T21:28:51.471985Z", - "iopub.status.idle": "2023-11-14T21:28:51.663408Z", - "shell.execute_reply": "2023-11-14T21:28:51.662640Z" + "iopub.execute_input": "2023-11-14T21:59:43.497733Z", + "iopub.status.busy": "2023-11-14T21:59:43.497130Z", + "iopub.status.idle": "2023-11-14T21:59:43.708818Z", + "shell.execute_reply": "2023-11-14T21:59:43.708139Z" } }, "outputs": [ @@ -1055,10 +1055,10 @@ "execution_count": 20, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:51.666246Z", - "iopub.status.busy": "2023-11-14T21:28:51.665980Z", - "iopub.status.idle": "2023-11-14T21:28:51.673684Z", - "shell.execute_reply": "2023-11-14T21:28:51.672961Z" + "iopub.execute_input": "2023-11-14T21:59:43.712901Z", + "iopub.status.busy": "2023-11-14T21:59:43.712358Z", + "iopub.status.idle": "2023-11-14T21:59:43.719671Z", + "shell.execute_reply": "2023-11-14T21:59:43.719006Z" } }, "outputs": [ @@ -1087,10 +1087,10 @@ "execution_count": 21, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:51.676773Z", - "iopub.status.busy": "2023-11-14T21:28:51.676361Z", - "iopub.status.idle": "2023-11-14T21:28:52.442786Z", - "shell.execute_reply": "2023-11-14T21:28:52.442015Z" + "iopub.execute_input": "2023-11-14T21:59:43.723630Z", + "iopub.status.busy": "2023-11-14T21:59:43.722866Z", + "iopub.status.idle": "2023-11-14T21:59:44.852702Z", + "shell.execute_reply": "2023-11-14T21:59:44.851705Z" } }, "outputs": [ @@ -1171,10 +1171,10 @@ "execution_count": 22, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:52.445793Z", - "iopub.status.busy": "2023-11-14T21:28:52.445359Z", - "iopub.status.idle": "2023-11-14T21:28:52.453165Z", - "shell.execute_reply": "2023-11-14T21:28:52.452613Z" + "iopub.execute_input": "2023-11-14T21:59:44.857108Z", + "iopub.status.busy": "2023-11-14T21:59:44.856387Z", + "iopub.status.idle": "2023-11-14T21:59:44.868146Z", + "shell.execute_reply": "2023-11-14T21:59:44.867296Z" } }, "outputs": [ @@ -1203,10 +1203,10 @@ "execution_count": 23, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:52.455830Z", - "iopub.status.busy": "2023-11-14T21:28:52.455446Z", - "iopub.status.idle": "2023-11-14T21:28:52.794651Z", - "shell.execute_reply": "2023-11-14T21:28:52.793853Z" + "iopub.execute_input": "2023-11-14T21:59:44.872256Z", + "iopub.status.busy": "2023-11-14T21:59:44.871612Z", + "iopub.status.idle": "2023-11-14T21:59:45.346926Z", + "shell.execute_reply": "2023-11-14T21:59:45.345984Z" } }, "outputs": [ @@ -1274,10 +1274,10 @@ "execution_count": 24, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:52.797838Z", - "iopub.status.busy": "2023-11-14T21:28:52.797379Z", - "iopub.status.idle": "2023-11-14T21:28:52.804250Z", - "shell.execute_reply": "2023-11-14T21:28:52.803706Z" + "iopub.execute_input": "2023-11-14T21:59:45.351551Z", + "iopub.status.busy": "2023-11-14T21:59:45.351185Z", + "iopub.status.idle": "2023-11-14T21:59:45.361138Z", + "shell.execute_reply": "2023-11-14T21:59:45.360243Z" } }, "outputs": [ @@ -1299,10 +1299,10 @@ "execution_count": 25, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:52.806883Z", - "iopub.status.busy": "2023-11-14T21:28:52.806498Z", - "iopub.status.idle": "2023-11-14T21:28:53.247561Z", - "shell.execute_reply": "2023-11-14T21:28:53.246814Z" + "iopub.execute_input": "2023-11-14T21:59:45.365176Z", + "iopub.status.busy": "2023-11-14T21:59:45.364557Z", + "iopub.status.idle": "2023-11-14T21:59:45.927496Z", + "shell.execute_reply": "2023-11-14T21:59:45.926269Z" } }, "outputs": [ @@ -1420,10 +1420,10 @@ "execution_count": 26, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:53.250578Z", - "iopub.status.busy": "2023-11-14T21:28:53.250156Z", - "iopub.status.idle": "2023-11-14T21:28:53.301172Z", - "shell.execute_reply": "2023-11-14T21:28:53.300420Z" + "iopub.execute_input": "2023-11-14T21:59:45.932202Z", + "iopub.status.busy": "2023-11-14T21:59:45.931292Z", + "iopub.status.idle": "2023-11-14T21:59:46.015827Z", + "shell.execute_reply": "2023-11-14T21:59:46.014714Z" } }, "outputs": [], @@ -1443,10 +1443,10 @@ "execution_count": 27, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:53.304252Z", - "iopub.status.busy": "2023-11-14T21:28:53.303869Z", - "iopub.status.idle": "2023-11-14T21:28:54.826075Z", - "shell.execute_reply": "2023-11-14T21:28:54.825223Z" + "iopub.execute_input": "2023-11-14T21:59:46.020658Z", + "iopub.status.busy": "2023-11-14T21:59:46.019765Z", + "iopub.status.idle": "2023-11-14T21:59:48.287679Z", + "shell.execute_reply": "2023-11-14T21:59:48.286927Z" } }, "outputs": [ @@ -1519,10 +1519,10 @@ "execution_count": 28, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:54.831305Z", - "iopub.status.busy": "2023-11-14T21:28:54.830707Z", - "iopub.status.idle": "2023-11-14T21:28:55.213414Z", - "shell.execute_reply": "2023-11-14T21:28:55.212624Z" + "iopub.execute_input": "2023-11-14T21:59:48.296381Z", + "iopub.status.busy": "2023-11-14T21:59:48.295661Z", + "iopub.status.idle": "2023-11-14T21:59:48.774987Z", + "shell.execute_reply": "2023-11-14T21:59:48.774031Z" } }, "outputs": [ @@ -1573,10 +1573,10 @@ "execution_count": 29, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:55.216489Z", - "iopub.status.busy": "2023-11-14T21:28:55.216204Z", - "iopub.status.idle": "2023-11-14T21:28:56.340582Z", - "shell.execute_reply": "2023-11-14T21:28:56.339850Z" + "iopub.execute_input": "2023-11-14T21:59:48.779102Z", + "iopub.status.busy": "2023-11-14T21:59:48.778513Z", + "iopub.status.idle": "2023-11-14T21:59:50.350641Z", + "shell.execute_reply": "2023-11-14T21:59:50.349952Z" } }, "outputs": [ @@ -1628,10 +1628,10 @@ "execution_count": 30, "metadata": { "execution": { - "iopub.execute_input": "2023-11-14T21:28:56.343692Z", - 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