Merge branch 'toy-interventions' of https://github.com/SABS-R3-Epidem…

…iology/epiabm into toy-interventions
SABS-R3-Epidemiology · Sep 26, 2023 · 50e6b52 · 50e6b52
2 parents 2faea26 + 5b10970
commit 50e6b52
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Showing 2 changed files with 3 additions and 16 deletions.
diff --git a/python_examples/toy_interventions/Int_params.json b/python_examples/toy_interventions/Int_params.json
@@ -435,27 +435,14 @@
         "prop_other_parent_away": 0.0
     },
     "intervention_params": {
-        "disease_testing": {
-            "start_time": 0,
-            "policy_duration": 365,
-            "case_threshold": 0,
-            "testing_capacity": [100,1000],
-            "false_positive": [0.023, 0.0032],
-            "false_negative": [0.2, 0.222],
-            "testing_asympt_uninf": [0.5, 0.5, 0.5],
-            "asympt_uninf_pcr": [0.2, 0.2, 0.2],
-            "testing_sympt": [1, 1, 1],
-            "sympt_pcr": [0.5, 0.5, 0.5]
-        },
-
         "case_isolation":
             {"start_time": 0,
             "policy_duration": 365,
             "case_threshold": 0,
             "isolation_delay": 0,
             "isolation_duration": 7,
             "isolation_probability": 0.9,
-            "use_testing": 1,
+            "use_testing": 0,
             "isolation_effectiveness": 0.25,
             "isolation_house_effectiveness": 0.5
         },
@@ -465,7 +452,7 @@
             "policy_duration": 365,
             "case_threshold": 0,
             "quarantine_delay": 0,
-            "quarantine_duration": 7,
+            "quarantine_duration": 14,
             "quarantine_house_compliant": 0.75,
             "quarantine_individual_compliant": 1.0,
             "quarantine_house_effectiveness": 1.5,

diff --git a/python_examples/toy_interventions/example_flow.py b/python_examples/toy_interventions/example_flow.py
@@ -13,7 +13,7 @@
 
 def main():
     # set parameters
-    repeats = 10
+    repeats = 5
     # repeats = 2
     # grid_sizes = [4, 15]
     grid_sizes = [4]