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create_fastq_key.R - needs more flexibility #3

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jackhump opened this issue Feb 22, 2021 · 0 comments
Open

create_fastq_key.R - needs more flexibility #3

jackhump opened this issue Feb 22, 2021 · 0 comments
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@bzmull

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@jackhump
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issue 1 : fastq folder is hardcoded as ./fastq/

issue 2: default code splits sample ID from FASTQ name by assuming sample ID is delimited by "_" and is the first element.

Solution: make more flexible by introducing parameters for the user to select exactly how these things are done.
@jackhump jackhump assigned jackhump and bzmull and unassigned jackhump Feb 22, 2021
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@jackhump @bzmull