-
Notifications
You must be signed in to change notification settings - Fork 0
/
dynamical_regime_comparison_simple_vs_hard_task_continuous_gen_plot.py
249 lines (208 loc) · 12.8 KB
/
dynamical_regime_comparison_simple_vs_hard_task_continuous_gen_plot.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
import numpy as np
from heat_capacity_parameter import calc_heat_cap_param_main
from automatic_plot_helper import all_sim_names_in_parallel_folder
from scipy import stats
import os
import pickle
import matplotlib.pyplot as plt
import time
import warnings
import seaborn as sns
from scipy.signal import savgol_filter
def comparison_main(folder_name_dict, plot_settings):
plt.rc('text', usetex=True)
folders_delta_dict = {}
folders_deltas_dict = {}
for key, folder_name in folder_name_dict.items():
if folder_name == '' or folder_name is None:
pass
else:
if plot_settings['only_plot']:
delta_dict, deltas_dict = load_plot_data(folder_name)
folders_delta_dict[key] = delta_dict
folders_deltas_dict[key] = deltas_dict
else:
if plot_settings['only_load_generation'] is None:
delta_dict, deltas_dict = load_dynamic_range_param(folder_name)
else:
delta_dict, deltas_dict = load_dynamic_range_param(folder_name, [plot_settings['only_load_generation']])
save_plot_data(folder_name, (delta_dict, deltas_dict))
folders_delta_dict[key] = delta_dict
folders_deltas_dict[key] = deltas_dict
plot_settings['savefolder_name'] = 'dynamical_regime_comparison_plot_{}' \
.format(time.strftime("%Y%m%d-%H%M%S"))
os.makedirs('save/{}/figs'.format(plot_settings['savefolder_name']))
plot_probability_density(folders_delta_dict, folders_deltas_dict, folder_name_dict, plot_settings)
plot_continuous(folders_delta_dict, plot_settings)
def plot_probability_density(folders_delta_dict, folders_deltas_dict, folder_name_dict, plot_settings):
font = {'family': 'serif', 'size': 47, 'serif': ['computer modern roman']}
plt.rc('font', **font)
plt.figure(figsize=(10, 5))
plot_keys = ['folder_simple_last_gen_delta', 'folder_hard_last_gen_delta']
colors = [plot_settings['our_colors']['lgreen'], plot_settings['our_colors']['sgreen']]
line_styles = ['solid', 'dashed']
labels = ['Simple Task', 'Hard Task']
for plot_key, color, label, line_style in zip(plot_keys, colors, labels, line_styles):
try:
delta_dict = folders_delta_dict[plot_key]
if len(list(delta_dict.keys())) == 1:
mean_delta_list_each_sim = delta_dict[list(delta_dict.keys())[0]]
else:
mean_delta_list_each_sim = delta_dict[str(plot_settings['compare_generation'])]
plt.hist(mean_delta_list_each_sim, bins=15, alpha=0.2, color=color, label= label)
sns.kdeplot(mean_delta_list_each_sim, data2=None, shade=False, vertical=False, color=color, linestyle=line_style)
plt.axvline(np.mean(mean_delta_list_each_sim), color=color, alpha=0.7, linestyle=line_style, linewidth=3)
except KeyError:
warnings.warn('Simulation for {} not loaded'.format(plot_key))
save_dir = 'save/{}/figs/'.format(plot_settings['savefolder_name'])
# plt.legend()
plt.ylabel('Density')
plt.xlabel(r'$\langle \delta \rangle$')
# plt.title(r'$\beta_\mathrm{init}=1$, Generation 4000')
plt.savefig(save_dir + 'probability_density.png', dpi=300, bbox_inches='tight')
plt.savefig(save_dir + 'probability_density.pdf', bbox_inches='tight')
plt.show()
def plot_continuous(folders_delta_dict, plot_settings):
font = {'family': 'serif', 'size': 28, 'serif': ['computer modern roman']}
plt.rc('font', **font)
fig, ax = plt.subplots(figsize=(10, 5))
# change this back!!!
plot_keys = ['folder_simple_continuous_delta', 'folder_hard_continuous_delta']
# plot_keys = ['folder_simple_continuous_delta']
# colors = ['olive', 'maroon']
colors = [plot_settings['our_colors']['lgreen'], plot_settings['our_colors']['sgreen']]
line_styles = ['solid', 'dashed']
labels = ['Simple Task', 'Hard Task']
for plot_key, color, label, line_style in zip(plot_keys, colors, labels, line_styles):
delta_dict = folders_delta_dict[plot_key]
plot_gens = []
plot_mean_deltas = []
plot_std_delta_low = []
plot_std_delta_high = []
for gen_str, mean_deltas_sims in delta_dict.items():
gen = int(gen_str)
plot_gens.append(gen)
mean_delta = np.mean(mean_deltas_sims)
std_delta = np.std(mean_deltas_sims)
plot_mean_deltas.append(mean_delta)
plot_std_delta_low.append(mean_delta - std_delta)
plot_std_delta_high.append(mean_delta + std_delta)
plot_gens = np.array(plot_gens)
plot_mean_deltas = np.array(plot_mean_deltas)
plot_std_delta_low = np.array(plot_std_delta_low)
plot_std_delta_high = np.array(plot_std_delta_high)
sort_gen_inds = np.argsort(plot_gens)
plot_gens = plot_gens[sort_gen_inds]
plot_mean_deltas = plot_mean_deltas[sort_gen_inds]
plot_std_delta_low = plot_std_delta_low[sort_gen_inds]
plot_std_delta_high = plot_std_delta_high[sort_gen_inds]
plot_mean_deltas = smooth_svgal(plot_mean_deltas)
plot_std_delta_low = smooth_svgal(plot_std_delta_low)
plot_std_delta_high = smooth_svgal(plot_std_delta_high)
ax.plot(plot_gens, plot_mean_deltas, color=color, label=label, linestyle=line_style)
ax.fill_between(plot_gens, plot_std_delta_low, plot_std_delta_high, alpha=0.2, color=color)
# plt.legend()
plt.xlabel('Generation')
plt.ylabel(r'$\langle \delta \rangle$')
save_dir = 'save/{}/figs/'.format(plot_settings['savefolder_name'])
plt.savefig(save_dir + 'continuous_generations.png', dpi=300, bbox_inches='tight')
plt.show()
def smooth_svgal(x_vec):
smoothed_x_vec = savgol_filter(x_vec, 11, 3)
# smoothed_x_vec = x_vec
return smoothed_x_vec
def converting_list_of_dicts_to_dict_of_lists(delta_dicts_all_sims):
# converting to
generations = list(delta_dicts_all_sims[0].keys())
dict_sorted_by_generatons = {}
for gen in generations:
dict_sorted_by_generatons[gen] = []
for delta_dict in delta_dicts_all_sims:
for gen in generations:
dict_sorted_by_generatons[gen].append(delta_dict[gen])
return dict_sorted_by_generatons
def load_dynamic_range_param(folder_name, gen_list=None):
sim_names = all_sim_names_in_parallel_folder(folder_name)
delta_dicts_all_sims = []
deltas_dicts_all_sims = []
for sim_name in sim_names:
module_settings = {}
mean_log_beta_distance_dict, log_beta_distance_dict, beta_distance_dict, beta_index_max, betas_max_gen_dict, \
heat_caps_max_dict, smoothed_heat_caps = calc_heat_cap_param_main(sim_name, module_settings, gen_list=gen_list,
gaussian_kernel=True)
delta_dict = mean_log_beta_distance_dict
delta_list_dict = log_beta_distance_dict
delta_dicts_all_sims.append(delta_dict)
deltas_dicts_all_sims.append(delta_list_dict)
# settings_list.append(load_settings(dir))
# delta_dicts_all_sims --> men of each generation, deltas_dicts_all_sims --> each individual in a list
delta_dict = converting_list_of_dicts_to_dict_of_lists(delta_dicts_all_sims)
deltas_dict = converting_list_of_dicts_to_dict_of_lists(deltas_dicts_all_sims)
return delta_dict, deltas_dict
def save_plot_data(folder_name, plot_data):
save_dir = 'save/{}/dynamical_range_plot_data/'.format(folder_name)
save_name = 'dynamical_range_data_compare_between_folders.pickle'
if not os.path.exists(save_dir):
os.makedirs(save_dir)
pickle_out = open(save_dir + save_name, 'wb')
pickle.dump(plot_data, pickle_out)
pickle_out.close()
def load_plot_data(folder_name):
save_dir = 'save/{}/dynamical_range_plot_data/'.format(folder_name)
save_name = 'dynamical_range_data_compare_between_folders.pickle'
print('Load plot data from: {}{}'.format(save_dir, save_name))
file = open(save_dir+save_name, 'rb')
attrs_lists = pickle.load(file)
file.close()
return attrs_lists
if __name__ == '__main__':
plot_settings = {}
plot_settings['only_plot'] = True
# Only works when 'only_plot' == False, should be None by default!!!!
plot_settings['only_load_generation'] = None #None #4000
plot_settings['compare_generation'] = 4000 #10
plot_settings['our_colors'] = {'lblue': '#8da6cbff', 'iblue': '#5e81b5ff', 'sblue': '#344e73ff',
'lgreen': '#b6d25cff', 'igreen': '#8fb032ff', 'sgreen': '#5e7320ff',
'lred': '#f2977aff', 'ired': '#eb6235ff', 'sred': '#c03e13ff'}
folder_name_dict = {}
# folder_name_dict['folder_simple_continuous_delta'] = 'sim-20201210-200605_parallel_b1_dynamic_range_c_20_g4000_t2000_10_sims'
# folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210226-023914_parallel_b1_default_task_significance_20_runs_delta_last_gen'
# folder_name_dict['folder_hard_continuous_delta'] = 'sim-20210226-023745_parallel_b1_break_eat_significance_10_runs_delta_every_20_gen'
# folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210226-023902_parallel_b1_break_eat_significance_20_runs_delta_last_gen'
#
# folder_name_dict['folder_simple_continuous_delta'] = ''
# folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210226-023914_parallel_b1_default_task_significance_20_runs_delta_last_gen'
# folder_name_dict['folder_hard_continuous_delta'] = ''
# folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210226-023902_parallel_b1_break_eat_significance_20_runs_delta_last_gen'
# folder_name_dict['folder_simple_continuous_delta'] = ''
# folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210226-023914_parallel_b1_default_task_significance_20_runs_delta_last_gen_HEL_ONLY_PLOT'
# folder_name_dict['folder_hard_continuous_delta'] = ''
# folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210226-023902_parallel_b1_break_eat_significance_20_runs_delta_last_gen_HEL_ONLY_PLOT'
# #
# folder_name_dict['folder_simple_continuous_delta'] = ''
# folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210302-215811_parallel_beta_linspace_rec_c20_TEST'
# folder_name_dict['folder_hard_continuous_delta'] = ''
# folder_name_dict['folder_hard_last_gen_delta'] = ''
# folder_name_dict['folder_simple_continuous_delta'] = 'sim-20201210-200605_parallel_b1_dynamic_range_c_20_g4000_t2000_10_sims'
# folder_name_dict['folder_simple_last_gen_delta'] = ''
# folder_name_dict['folder_hard_continuous_delta'] = 'sim-20210226-023745_parallel_b1_break_eat_significance_10_runs_delta_every_20_gen'
# folder_name_dict['folder_hard_last_gen_delta'] = ''
# folder_name_dict['folder_simple_continuous_delta'] = 'sim-20201210-200605_parallel_b1_dynamic_range_c_20_g4000_t2000_10_sims_HEL_ONLY_PLOT'
# folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210226-023914_parallel_b1_default_task_significance_20_runs_delta_last_gen_HEL_ONLY_PLOT'
# folder_name_dict['folder_hard_continuous_delta'] = 'sim-20210226-023745_parallel_b1_break_eat_significance_10_runs_delta_every_20_gen_HEL_ONLY_PLOT'
# folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210226-023902_parallel_b1_break_eat_significance_20_runs_delta_last_gen_HEL_ONLY_PLOT'
folder_name_dict['folder_simple_continuous_delta'] = 'sim-20201210-200605_parallel_b1_dynamic_range_c_20_g4000_t2000_10_sims_HEL_ONLY_PLOT'
folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210305-223243_parallel_b1_break_eat_significance_44_runs_delta_last_gen_HEL_ONLY_PLOT'
folder_name_dict['folder_hard_continuous_delta'] = 'sim-20210226-023745_parallel_b1_break_eat_significance_10_runs_delta_every_20_gen_HEL_ONLY_PLOT'
folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210305-223257_parallel_b1_default_task_significance_44_runs_delta_last_gen_HEL_ONLY_PLOT'
#
# beta_jumps_simple_task
# folder_name_dict['folder_simple_continuous_delta'] = 'sim-20201029-192538_parallel_b1_beta_jump_normal_run_HEL_ONLY_PLOT'
# folder_name_dict['folder_simple_last_gen_delta'] = ''
# folder_name_dict['folder_hard_continuous_delta'] = ''
# folder_name_dict['folder_hard_last_gen_delta'] = ''
folder_name_dict['folder_simple_continuous_delta'] = 'sim-20210309-131629_parallel_extend_b1_simple_task_by_4000_generations_HEL_ONLY_PLOT'
folder_name_dict['folder_simple_last_gen_delta'] = 'sim-20210305-223257_parallel_b1_default_task_significance_44_runs_delta_last_gen_HEL_ONLY_PLOT'
folder_name_dict['folder_hard_continuous_delta'] = 'sim-20210309-134302_parallel_extend_b1_hard_task_by_4000_generations_HEL_ONLY_PLOT'
folder_name_dict['folder_hard_last_gen_delta'] = 'sim-20210305-223243_parallel_b1_break_eat_significance_44_runs_delta_last_gen_HEL_ONLY_PLOT'
comparison_main(folder_name_dict, plot_settings)