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chore: fix args in github action
Dry Runs #26: Commit 8034709 pushed by rroutsong
October 17, 2023 04:03 59s ngs_qc_qa_workflow
October 17, 2023 04:03 59s
fix: dry run action needs -s kwarg
Dry Runs #25: Commit 160e368 pushed by rroutsong
October 17, 2023 03:59 1m 19s ngs_qc_qa_workflow
October 17, 2023 03:59 1m 19s
fix: snakemake pathing correction
Dry Runs #24: Commit 64252ef pushed by rroutsong
October 17, 2023 03:27 59s ngs_qc_qa_workflow
October 17, 2023 03:27 59s
feat: finalize first half of ngsqc pipeline
Dry Runs #23: Commit b8a3b48 pushed by rroutsong
October 17, 2023 00:21 1m 1s ngs_qc_qa_workflow
October 17, 2023 00:21 1m 1s
chore: ignore jsons, lower latentcy wait for biowulf
Dry Runs #22: Commit 0101883 pushed by rroutsong
October 13, 2023 21:48 56s ngs_qc_qa_workflow
October 13, 2023 21:48 56s
feat: python module support for ngs qc-qa
Dry Runs #21: Commit 0f5d1a0 pushed by rroutsong
October 13, 2023 21:47 1m 13s ngs_qc_qa_workflow
October 13, 2023 21:47 1m 13s
final ngsqc dockerfile
Dry Runs #20: Commit 5a4b4fe pushed by rroutsong
October 12, 2023 15:09 1m 7s ngs_qc_qa_workflow
October 12, 2023 15:09 1m 7s
add in fastq screen config to docker
Dry Runs #19: Commit b0f0407 pushed by rroutsong
October 11, 2023 22:40 1m 1s ngs_qc_qa_workflow
October 11, 2023 22:40 1m 1s
ngsqc fastqc, trimming, fastqc again after trim
Dry Runs #18: Commit 88d43eb pushed by rroutsong
October 10, 2023 14:17 1m 0s ngs_qc_qa_workflow
October 10, 2023 14:17 1m 0s
merge in dry_run action changes
Dry Runs #16: Commit 80d48c0 pushed by rroutsong
October 6, 2023 15:53 1m 25s ngs_qc_qa_workflow
October 6, 2023 15:53 1m 25s
Dry run action (#5)
Dry Runs #15: Commit cea0561 pushed by skchronicles
October 5, 2023 18:28 1m 22s main
October 5, 2023 18:28 1m 22s
remove docker req
Dry Runs #13: Commit 7be7e51 pushed by rroutsong
October 5, 2023 17:23 1m 1s dry_run_action
October 5, 2023 17:23 1m 1s
remove NGS QA QC docker
Dry Runs #12: Commit 594324c pushed by rroutsong
October 5, 2023 17:09 1m 4s dry_run_action
October 5, 2023 17:09 1m 4s
de-id testing samplesheet
Dry Runs #11: Commit b5fda19 pushed by rroutsong
October 5, 2023 17:07 1m 1s dry_run_action
October 5, 2023 17:07 1m 1s
change SMK_CONFIG to SNK_CONFIG
Dry Runs #10: Commit 631ad18 pushed by rroutsong
October 5, 2023 16:08 1m 5s dry_run_action
October 5, 2023 16:08 1m 5s
add SNK_CONFIG to linting docker run
Dry Runs #9: Commit a49b8e1 pushed by rroutsong
October 5, 2023 16:04 1m 4s dry_run_action
October 5, 2023 16:04 1m 4s
-h must be before docker run cmd
Dry Runs #8: Commit c0944a3 pushed by rroutsong
October 5, 2023 16:00 1m 3s dry_run_action
October 5, 2023 16:00 1m 3s
set hostname on running container
Dry Runs #7: Commit 7d2ed6d pushed by rroutsong
October 5, 2023 15:56 1m 0s dry_run_action
October 5, 2023 15:56 1m 0s
bash -c
Dry Runs #6: Commit 2285947 pushed by rroutsong
October 5, 2023 15:48 57s dry_run_action
October 5, 2023 15:48 57s
update shebangs, setuptools reqs, dryrun pip install
Dry Runs #5: Commit 8152888 pushed by rroutsong
October 5, 2023 15:40 1m 12s dry_run_action
October 5, 2023 15:40 1m 12s
add +x to bin/dmux
Dry Runs #4: Commit d3d9dc2 pushed by rroutsong
October 5, 2023 15:25 48s dry_run_action
October 5, 2023 15:25 48s
fix dmux binary location typo
Dry Runs #3: Commit 2384f30 pushed by rroutsong
October 5, 2023 15:21 48s dry_run_action
October 5, 2023 15:21 48s
update triggers
Dry Runs #2: Commit da43ef0 pushed by rroutsong
October 5, 2023 15:17 1m 8s dry_run_action
October 5, 2023 15:17 1m 8s