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Installation issues under Linux due to vamp #29

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hagenw opened this issue Jul 7, 2021 · 3 comments
Closed

Installation issues under Linux due to vamp #29

hagenw opened this issue Jul 7, 2021 · 3 comments

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@hagenw
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hagenw commented Jul 7, 2021

As mentioned already in #26 the straightforward installation with pip can fail due to vamp.

I got under Ubuntu 18.04 using Python 3.6.9:

$ pip install omnizart
...
ERROR: Cannot install omnizart==0.1.0, omnizart==0.1.1, omnizart==0.2.0, omnizart==0.3.0, omnizart==0.3.1, omnizart==0.3.2, omnizart==0.3.3, omnizart==0.3.4, omnizart==0.4.0 and omnizart==0.4.1 because these package versions have conflicting dependencies.

Installing numpy manually first as proposed in #26 does indeed solve this issue. I'm not completely sure if this can be solved by putting numpy as a direct dependency to setup.py as proposed in #26, but maybe you can try. Otherwise please expand the installation instructions accordingly.

@BreezeWhite
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I've tried to explicitly put numpy as the dependency, but seems not work. I've updated the documentation to inform users to install numpy and Cython before installing omnizart.

@keunwoochoi
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(Commenting to link this to openjournals/joss-reviews#3391)

@hagenw
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hagenw commented Jul 21, 2021

Thanks.

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