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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export("%>%")
export(CharacterizeMSPeaks)
export(PeakPickingAnalysis)
export(PeakRegionFinder)
export(PeakRegions)
export(RawMS)
export(ZipMS)
export(add_to_zip)
export(anova_matrix_test)
export(anova_test)
export(basic_peak_center_intensity)
export(bootstrap_samples)
export(calculate_density)
export(calculate_rsd)
export(characterize_peaks)
export(check_for_zip)
export(check_frequency_r2)
export(check_zip_file)
export(convert_mz_frequency)
export(correct_mean)
export(correct_peak)
export(correct_peak_sd_height)
export(correct_variance)
export(count_raw_peaks)
export(create_frequency_regions)
export(default_correct_offset_function)
export(default_offset_predict_function)
export(default_scan_filter)
export(define_peak_type)
export(disable_logging)
export(every_scan_frequency)
export(exponential_fit)
export(exponential_predict)
export(extract_raw_method)
export(find_peaks)
export(find_peaks_diff)
export(find_signal_regions)
export(frequency_points_to_frequency_regions)
export(get_cauchy_peak_info)
export(get_fitted_peak_info)
export(get_ms_info)
export(get_mzml_header)
export(get_mzml_metadata)
export(get_peak_info)
export(get_raw_ms_metadata)
export(import_raw_ms)
export(import_xcalibur)
export(indicate_standards_contaminents)
export(initialize_metadata_from_mzml)
export(initialize_zip_metadata)
export(integrate_model)
export(json_2_peak_list)
export(json_mzML_2_df)
export(lists_2_json)
export(load_metadata)
export(loess_to_df)
export(log_memory)
export(log_message)
export(log_peaks)
export(meta_export_json)
export(model_peak_center_intensity)
export(mz_frequency_interpolation)
export(mz_points_to_frequency_regions)
export(mz_scans_to_frequency)
export(mzml_to_zip)
export(peak_info)
export(peak_info2)
export(peak_list_2_json)
export(plot_peaks)
export(plot_raw_peaks)
export(plot_tic)
export(pracma_findpeaks)
export(predicted_frequency_r2)
export(raw_metadata_mzml)
export(raw_peak_intensity)
export(raw_peaks)
export(recalculate_offsets)
export(run_mzml_list)
export(sample_run_time)
export(scan_mzML)
export(scan_time_filter)
export(set_internal_map)
export(show_progress)
export(split_region_by_peaks)
export(ssr)
export(system_check)
export(tic_normalization)
export(transform_residuals)
export(zip_list_contents)
export(zip_ms)
importFrom(IRanges,IRanges)
importFrom(R.utils,getAbsolutePath)
importFrom(R.utils,isAbsolutePath)
importFrom(R6,R6Class)
importFrom(S4Vectors,mcols)
importFrom(XML,getNodeSet)
importFrom(XML,xmlAttrs)
importFrom(XML,xmlChildren)
importFrom(XML,xmlNamespaceDefinitions)
importFrom(XML,xmlRoot)
importFrom(XML,xmlToList)
importFrom(XML,xmlTreeParse)
importFrom(assertthat,assert_that)
importFrom(broom,tidy)
importFrom(dplyr,filter_)
importFrom(dplyr,tbl_df)
importFrom(forcats,fct_relevel)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(jsonlite,fromJSON)
importFrom(jsonlite,toJSON)
importFrom(magrittr,"%>%")
importFrom(pracma,findpeaks)
importFrom(purrr,map)
importFrom(purrr,map_df)
importFrom(purrr,map_lgl)
importFrom(readxl,read_excel)
importFrom(stats,lm.fit)
importFrom(stats,lm.wfit)
importFrom(stats,poly)
importFrom(stats,weighted.mean)
importFrom(tibble,as_tibble)
importFrom(tictoc,tic)
importFrom(tictoc,toc)
importFrom(xcms,getScan)
importFrom(xcms,getSpec)
importFrom(xcms,xcmsRaw)