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dependencies.md

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List of all dependencies

This lists all apt-get dependencies. These dependencies can be installed using apt ansible tag.

apt-get

Essentials

  • gcc
  • make
  • cmake
  • unzip

Lua

  • lua5.2
  • liblua5.2-dev
  • lua-filesystem
  • lua-posix

lmod

  • tcl

htslib

  • zlib1g-dev
  • libncurses-dev

BigDataScript

  • golang-go
  • ant

extras

  • pandoc
  • pandoc-citeproc
  • vim
  • tmux
  • git
  • curl
  • htop
  • zsh
  • texlive
  • texlive-latex-extra

python

  • python-pip
  • python3-pip
  • python-dev
  • libssl-dev
  • libssl-doc
  • zlib1g-dev

R

  • libcurl4-openssl-dev
  • libxml2-dev

RStudio

  • libapparmor1