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MFAToolkit mkdir error #2

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pfrybar opened this issue Aug 13, 2012 · 2 comments
Open

MFAToolkit mkdir error #2

pfrybar opened this issue Aug 13, 2012 · 2 comments
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@pfrybar
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pfrybar commented Aug 13, 2012

I keep getting this error when running FBA/gapfilling:

'mkdir: cannot create directory `/tmp/fbajobs/nMekMbBbJ5/MFAOutput': File exists'

It's not a serious error, but it's a bit misleading, would be nice if we could fix it.

@cshenry
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cshenry commented Aug 13, 2012

Yeah. Problem is, I don't know how to check if a directory exists in C++ without using an OS specific library.
I suppose since we ALWAYS make the MFAOutput directory before running the MFAToolkit, we could remove the mkdir call entirely, thus eliminating the pesky error.
Chris

On Aug 13, 2012, at 5:38 PM, pfrybar wrote:

I keep getting this error when running FBA/gapfilling:

'mkdir: cannot create directory `/tmp/fbajobs/nMekMbBbJ5/MFAOutput': File exists'

It's not a serious error, but it's a bit misleading, would be nice if we could fix it.


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@pfrybar
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pfrybar commented Aug 14, 2012

Ahh I see... alright, we can try to figure this out later.

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