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dataset-description-template.xml
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dataset-description-template.xml
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<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="#odml_local_style"?>
<!DOCTYPE odML [ <!ATTLIST xsl:stylesheet id ID #REQUIRED> ]>
<odML version="1.1">
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</style><body><header><h1><a class="white" href="https://templates.g-node.org/templates.xml">odML metadata document</a></h1></header><div class="navWrapper"><navigationContainer><div id="navigationContainer"><hr class="fatline" /><p><h2>Document info</h2><b>Author: </b><xsl:if test="author"><xsl:value-of select="author"/></xsl:if><br/><b>Date: </b><xsl:if test="date"><xsl:value-of select="date"/></xsl:if><br/><b>Version: </b><xsl:if test="version"><xsl:value-of select="version"/></xsl:if><br/><b>Repository: </b><xsl:if test="repository"><xsl:value-of select="repository"/></xsl:if><br/></p><hr class="fatline" /><h2>Structure</h2><font size ="-1" ><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation">1</xsl:with-param><xsl:with-param name="anchorBase">Sec</xsl:with-param><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></font><br/></div><div id="contentContainer"><hr class="fatline" /><h2>Content</h2><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation">0</xsl:with-param><xsl:with-param name="anchorBase">Sec</xsl:with-param><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></div></navigationContainer></div></body></html></xsl:template><xsl:template name="sectionTemplate" match="section"><xsl:param name="navigation"/><xsl:param name="anchorBase"/><xsl:param name="url"/><xsl:variable name="anchorName" select="concat($anchorBase,position())"/><xsl:variable name="repository"><xsl:choose><xsl:when test="repository"><xsl:value-of select ="repository"/></xsl:when><xsl:otherwise><xsl:value-of select ="$url"/></xsl:otherwise></xsl:choose></xsl:variable><xsl:choose><xsl:when test="$navigation = 1"><ol class="nested"><font size="normal"><a href="#{$anchorName}"><xsl:value-of select="name"/> (type: <xsl:value-of select="type"/>)</a></font><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation" select="$navigation"/><xsl:with-param name="anchorBase" select="concat($anchorName,'SubSec')"/><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></ol></xsl:when><xsl:otherwise><a name="{$anchorName}"><h3><xsl:value-of select="name"/> Section</h3></a><p><b>Type: </b><xsl:value-of select="type"/><br/><xsl:choose><xsl:when test ="repository"><b>Repository: </b><xsl:value-of select="repository"/><br/></xsl:when><xsl:otherwise><b>Repository: </b><xsl:value-of select="$repository"/><br/></xsl:otherwise></xsl:choose><b>Link: </b><xsl:if test="link"><xsl:value-of select="link"/></xsl:if><br/><b>Include:</b><xsl:if test="include"><font color="red"><xsl:value-of select="include"/></font></xsl:if><br/><b>Definition: </b><xsl:if test="definition"><xsl:value-of select="definition"/></xsl:if><br/></p><xsl:if test="property"><table border="1" rules="rows" width="100%"><font size="-1"><tr bgcolor="#336699" align="left" valign="middle"><th><font size="+1" color="white"><b>Name</b></font></th><th><font size="+1" color="white"><b>Value</b></font></th><th><font size="+1" color="white"><b>Unit</b></font></th><th><font size="+1" color="white"><b>Type</b></font></th><th><font size="+1" color="white"><b>Uncertainty</b></font></th><th><font size="+1" color="white"><b>Definition</b></font></th><th><font size="+1" color="white"><b>Dependency</b></font></th><th><font size="+1" color="white"><b>Dependency Value</b></font></th></tr><xsl:for-each select="property"><xsl:variable name="anchor"><xsl:value-of select ="name"/></xsl:variable><tr><td width="15%"><a name="{$anchor}"/><p><xsl:value-of select="name"/></p></td><td width="10%"><p><xsl:value-of select="value"/></p></td><td width="5%"><p><xsl:value-of select="unit"/><br/></p></td><td width="5%"><p><xsl:value-of select="type"/></p></td><td width="5%"><p><xsl:value-of select="uncertainty"/><br/></p></td><td width="22.5%"><p><xsl:value-of select="definition"/></p></td><td width="5%"><p><xsl:value-of select="dependency"/></p></td><td width="5%"><p><xsl:value-of select="dependencyValue"/></p></td></tr></xsl:for-each></font></table></xsl:if><a href="#top"><tiny>top</tiny></a><hr class="thinline" /><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation" select="$navigation"/><xsl:with-param name="anchorBase" select="concat($anchorName,'SubSec')"/><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></xsl:otherwise></xsl:choose></xsl:template>
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<id>a22b68fa-d8e9-471e-9c7f-aae64bca36a3</id>
<version>1.0</version>
<author>Reema Gupta</author>
<section>
<id>be597443-dc60-4f4f-8c94-98b834c122cd</id>
<type>n.s.</type>
<name>dataset-description</name>
<definition>Dataset-description-template template schema generated by the CEDAR Template Editor 2.6.56</definition>
<section>
<id>83e6441c-d147-4a7d-aea6-0f3fd38744b7</id>
<type>n.s.</type>
<name>in2pb-header</name>
<definition>Header to be used for metadata templates created for In2PB projects.</definition>
<property>
<id>5ff1716b-a73c-455e-bf27-9a4beeb846d2</id>
<name>in2pb-header</name>
<value></value>
<definition>Header to be used for metadata templates created for In2PB projects.</definition>
</property>
</section>
<section>
<id>a7d3b67e-72f4-4021-8c64-a9018fc3cd38</id>
<type>n.s.</type>
<name>dataset-description-header</name>
<definition>Header with instructions for the dataset description metadata.</definition>
<property>
<id>f9b6f901-8a63-424a-9d3a-acd72ab7a7f6</id>
<name>dataset-description-header</name>
<value></value>
<definition>Header with instructions for the dataset description.</definition>
</property>
</section>
<section>
<id>9066c6a2-14f0-4e12-972c-16d01069f3fe</id>
<type>n.s.</type>
<name>dataset-general-element</name>
<definition>Metadata describing the entire dataset.</definition>
<property>
<id>afb64bc5-3296-47e0-b9d8-b358751e7724</id>
<name>title</name>
<value></value>
<definition>Name of the dataset.</definition>
</property>
<property>
<id>c98a2736-8a76-47f9-8188-19380017e986</id>
<name>description</name>
<value></value>
<definition>A brief abstract describing the dataset.</definition>
</property>
<property>
<id>f5b0689f-191c-4258-8821-1328b0b73292</id>
<name>datasetType</name>
<value></value>
<definition>The type(s) of data present in the dataset.</definition>
</property>
<property>
<id>17774613-2d0b-4001-992d-a780d6190fd3</id>
<name>datasetLicense</name>
<value></value>
<definition>The open-source license associated with the use of the dataset being described. Use this URL to choose a creative commons license: https://chooser-beta.creativecommons.org/</definition>
</property>
<property>
<id>7f306443-bb46-430a-9acb-4b30d1643ef7</id>
<name>otherDatasetLicense</name>
<value></value>
<definition>Use this field to specify the license name and URL if "other" is used in the field above.</definition>
</property>
<property>
<id>eaf3d3ae-d59f-4e8c-938e-18dae26c32bd</id>
<name>acknowledgements</name>
<value></value>
<definition>Text acknowledging contributions of individuals or institutions beyond those listed in authors or funding.</definition>
</property>
<property>
<id>5335eaa3-0ac1-4866-908e-6ee86c62e805</id>
<name>howToAcknowledge</name>
<value></value>
<definition>Text containing instructions on how researchers using this dataset should acknowledge the original authors. This field can also be used to define a publication that should be cited in publications that use the dataset.</definition>
</property>
<property>
<id>9662fcae-3d3c-4260-8d00-84264988660a</id>
<name>funding</name>
<value></value>
<definition>List of sources of funding. Please use grant numbers wherever possible.</definition>
</property>
<property>
<id>80737d04-ddc6-445d-955c-df94ab3edccb</id>
<name>ethicsApproval</name>
<value></value>
<definition>Specifies documented ethics approval for animal experiments, ensuring compliance with ethical and welfare standards. Required to demonstrate adherence to ethical guidelines and humane treatment of animals.</definition>
</property>
<property>
<id>47afa2ca-dcd9-4c5b-9b20-78ff75384035</id>
<name>datasetDOI</name>
<value></value>
<definition>Indicate the dataset's unique Digital Object Identifier (DOI), ensuring it refers to the dataset itself rather than any associated publications. Format DOIs as valid URIs, starting with 'doi:' followed by the identifier.</definition>
</property>
</section>
<section>
<id>e6e5d7f3-83fa-40e0-bb6b-38d235988689</id>
<type>n.s.</type>
<name>author-element</name>
<definition>Template element for authors' information.</definition>
<property>
<id>8efe27d1-72d2-4309-92d4-a97c904486ba</id>
<name>firstName</name>
<value></value>
<definition>First name of the author.</definition>
</property>
<property>
<id>4571464c-de74-401e-8982-ad1e896c3b2d</id>
<name>lastName</name>
<value></value>
<definition>Last name of the author.</definition>
</property>
<property>
<id>3354d3aa-5b17-4d48-ad93-4b33bbdfa0f1</id>
<name>authorAffiliation</name>
<value></value>
<definition>Affiliation of the author.</definition>
</property>
<property>
<id>a1534a38-4a19-4782-925d-c1da90d49b5e</id>
<name>authorIdentifier</name>
<value></value>
<definition>DIgital identifier of the author such as the ORCID. Include the prefix to indicate its type.</definition>
</property>
</section>
<section>
<id>365f8e19-d48b-4998-b9f6-dc44ae1e7dc7</id>
<type>n.s.</type>
<name>in2pb-element</name>
<definition>List of In2PrimateBrains entities that contributed to this dataset.</definition>
<property>
<id>63c89eed-81f4-4fb9-b70d-4ab366e237d7</id>
<name>in2pbProject</name>
<value></value>
<definition>PhD project associated with In2PB entity. To be left empty for partner entity.</definition>
</property>
</section>
<section>
<id>f769353f-6d46-4cc1-b252-d4de8e7c0728</id>
<type>n.s.</type>
<name>reference-element</name>
<definition>Element for describing reference.</definition>
<property>
<id>99fd75b7-4c68-4281-9f7e-01f892598733</id>
<name>refernceIdentifier</name>
<value></value>
<definition>Digital identifier (e.g., DOI, arXiv, PMID, URL) of the refernce if possible. Add a prefix to the ID, separated by a colon, to indicate the type of identifier. If assignment of an identifier is pending, enter "doi:tba" as placeholder.</definition>
</property>
<property>
<id>9b03495f-e94b-41bd-85f4-26631214c888</id>
<name>referenceType</name>
<value></value>
<definition>The relationship of this dataset to the referenced resource.</definition>
</property>
<property>
<id>ab7e3d25-3623-43ca-b5a7-f4db25dd7670</id>
<name>referenceCitation</name>
<value></value>
<definition>Please provide the full reference, including title, authors, journal etc., like in the reference section of a paper. If an unpublished manuscript is referenced, enter as much citation information as available, and update when the paper is published.</definition>
</property>
</section>
<section>
<id>fa6eca91-80ad-4698-b24c-94e0b3d47699</id>
<type>n.s.</type>
<name>dataset-experiment-element</name>
<definition>An overview description of the experiment, the data was recorded from.</definition>
<property>
<id>cf19a035-bcd4-43d3-b5ec-7e4e168c8435</id>
<name>animalModel</name>
<value></value>
<definition>List of animal model(s) the recorded data is from.</definition>
</property>
<property>
<id>a00e83d0-8c98-46ec-91f0-f0c036c1aeb4</id>
<name>recordingRegion</name>
<value></value>
<definition>List of anatomical regions the nerual data is recorded from.</definition>
</property>
<property>
<id>ea903d48-6dbc-4791-96e0-7e14e82d0a44</id>
<name>recordingProtocol</name>
<value></value>
<definition>Electrophysiological assays that were used to generate the data.</definition>
</property>
</section>
<section>
<id>d53f9163-389c-4548-88a2-cb26cd8ebf6f</id>
<type>n.s.</type>
<name>free-text-field</name>
<definition>A free text element to allow the user to provide any additional information.</definition>
</section>
<property>
<id>592dc5fe-06fa-4644-820b-38b606f8c5c6</id>
<name>free-text-field</name>
<value></value>
<definition>A free text element to allow the user to provide any additional information.</definition>
</property>
</section>
</odML>