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isatools documentation

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David Johnson edited this page Feb 24, 2016 · 3 revisions

The ISA API is published as the isatools Python package. The package aims to provide you, the developer, with a set of tools to help you easily and quickly build your own ISA objects, validate, and convert between serializations of ISA-formatted and other kinds of data format. The goal of this package is to provide a flexible way to build and use ISA content, as well as provide utility functions for file conversions and validation.

  1. Installation
  2. Creating ISA objects
  3. Converting between ISA formats
  4. Importing and exporting SRA format
  5. Validating ISAtab and ISA JSON
  6. Known Issues

License

CPAL License

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  1. Installation
  2. ISA model
  3. Creating objects
  4. Converting between ISA formats
  5. Importing and exporting SRA formatted datasets
  6. Downloading files stored in Github
  7. Validating ISA tab and ISA JSON
  8. Known Issues
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