diff --git a/.github/workflows/publishdocs.yaml b/.github/workflows/publishdocs.yaml new file mode 100644 index 0000000..ba3f2f0 --- /dev/null +++ b/.github/workflows/publishdocs.yaml @@ -0,0 +1,19 @@ +--- +name: Publish docs via GitHub Pages +on: + push: + branches: + - main + +jobs: + build: + name: Deploy docs + runs-on: ubuntu-latest + steps: + - name: Checkout master + uses: actions/checkout@v4 + + - name: Deploy docs + uses: mhausenblas/mkdocs-deploy-gh-pages@master + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/LICENSE b/LICENSE new file mode 100644 index 0000000..d591978 --- /dev/null +++ b/LICENSE @@ -0,0 +1,397 @@ +Attribution 4.0 International + +Copyright (c) 2018-2022, BIDS Contributors. + +======================================================================= + +Creative Commons Corporation ("Creative Commons") is not a law firm and +does not provide legal services or legal advice. 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Except for the limited purpose of indicating that +material is shared under a Creative Commons public license or as +otherwise permitted by the Creative Commons policies published at +creativecommons.org/policies, Creative Commons does not authorize the +use of the trademark "Creative Commons" or any other trademark or logo +of Creative Commons without its prior written consent including, +without limitation, in connection with any unauthorized modifications +to any of its public licenses or any other arrangements, +understandings, or agreements concerning use of licensed material. For +the avoidance of doubt, this paragraph does not form part of the +public licenses. + +Creative Commons may be contacted at creativecommons.org. diff --git a/README.md b/README.md index 8f6895a..6f98724 100644 --- a/README.md +++ b/README.md @@ -50,10 +50,4 @@ If you want to join this project, please check out our [INCF Working Group](http ARTEM-IS is developed by an [INCF working group](https://www.incf.org/sig/incf-working-group-artem), in partnership with [eCOBIDAS](https://www.incf.org/sig/incfohbm-working-group-checklists-transparent-methods-reporting-neuroscience-ecobidas). -A centralized list of the people who contributed to this project can be found [here](https://osf.io/ut9pc/). - -## License - -The template is licensed CC-BY-4.0 - -(c) 2020 INCF Working Group on ARTEMIS +A centralized list of the people who contributed to this project can be found [here](https://osf.io/ut9pc/). \ No newline at end of file diff --git a/mkdocs.yml b/mkdocs.yml new file mode 100644 index 0000000..6fc9cdb --- /dev/null +++ b/mkdocs.yml @@ -0,0 +1,70 @@ +# See https://www.mkdocs.org/ for more info on the config +--- +site_name: ARTEM-IS +repo_url: https://github.com/INCF/artem-is + +nav: +- ARTEM-IS: index.md +- Details: + - Scope: details/scope.md +- lexicon: lexicon.md +- links: links.md +- Contributors: CONTRIBUTING.md +- Release notes: CHANGELOG.md + +theme: + name: material + favicon: images/favicon/favicon-32x32.png + logo: images/logos/logo.png + features: + - navigation.top + - content.action.edit + icon: + repo: fontawesome/brands/github + edit: material/pencil + palette: + # Palette toggle for automatic mode + - media: (prefers-color-scheme) + toggle: + icon: material/brightness-auto + name: Switch to light mode + # Palette toggle for light mode + - media: '(prefers-color-scheme: light)' + scheme: default + toggle: + icon: material/brightness-7 + name: Switch to dark mode + # Palette toggle for dark mode + - media: '(prefers-color-scheme: dark)' + scheme: slate + toggle: + icon: material/brightness-4 + name: Switch to system preference + +copyright: Copyright © INCF Working Group on ARTEMIS - CC BY 4.0 + +edit_uri: edit/main/src/ + +extra: + generator: false + social: + # X / Twitter + # - icon: fontawesome/brands/twitter + # link: https://twitter.com/???? + - icon: fontawesome/brands/github + link: https://github.com/INCF/artem-is.git + # Google group ? + # - icon: fontawesome/brands/google + # link: https://groups.google.com/g/???? + +markdown_extensions: +- toc: + anchorlink: true +- pymdownx.superfences + +plugins: +- search + +docs_dir: src + +use_directory_urls: false diff --git a/requirements.txt b/requirements.txt index ee974b2..51e39c0 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,3 +1,14 @@ +# documentation deployment +mkdocs>=1.1 +mkdocs-material>=5.4 +# checklist maintenance gdown pandas rich +# linting, styling, validation +black +flake8 +cffconvert +pre-commit +sourcery + diff --git a/requirements_dev.txt b/requirements_dev.txt deleted file mode 100644 index 2a14012..0000000 --- a/requirements_dev.txt +++ /dev/null @@ -1,3 +0,0 @@ -black -pre-commit -sourcery diff --git a/src/CHANGELOG.md b/src/CHANGELOG.md new file mode 100644 index 0000000..b701299 --- /dev/null +++ b/src/CHANGELOG.md @@ -0,0 +1 @@ +# Release notes \ No newline at end of file diff --git a/CONTRIBUTING.md b/src/CONTRIBUTING.md similarity index 76% rename from CONTRIBUTING.md rename to src/CONTRIBUTING.md index 6c144b0..41712e4 100644 --- a/CONTRIBUTING.md +++ b/src/CONTRIBUTING.md @@ -27,3 +27,25 @@ It can be triggered manually: in the `Conversation` tab. ![merge](./images/merge.png) + + +## Serve the website locally (on your computer) + +### Requirements + +- Python + +To install all the necessarry packages, +type the following in a terminal in the root of the repository: + +```bash +pip install -r requirments.txt +``` + +### Serve the website + +Type the following in a terminal in the root of the repository: + +```bash +mkdocs serve +``` \ No newline at end of file diff --git a/src/details/scope.md b/src/details/scope.md new file mode 100644 index 0000000..fc1ce70 --- /dev/null +++ b/src/details/scope.md @@ -0,0 +1 @@ +# Just an example \ No newline at end of file diff --git a/src/images/favicon/android-chrome-192x192.png b/src/images/favicon/android-chrome-192x192.png new file mode 100644 index 0000000..a77daff Binary files /dev/null and b/src/images/favicon/android-chrome-192x192.png differ diff --git a/src/images/favicon/android-chrome-512x512.png b/src/images/favicon/android-chrome-512x512.png new file mode 100644 index 0000000..0a46f7b Binary files /dev/null and b/src/images/favicon/android-chrome-512x512.png differ diff --git a/src/images/favicon/apple-touch-icon.png b/src/images/favicon/apple-touch-icon.png new file mode 100644 index 0000000..505e3de Binary files /dev/null and b/src/images/favicon/apple-touch-icon.png differ diff --git a/src/images/favicon/favicon-16x16.png b/src/images/favicon/favicon-16x16.png new file mode 100644 index 0000000..707a1d4 Binary files /dev/null and b/src/images/favicon/favicon-16x16.png differ diff --git a/src/images/favicon/favicon-32x32.png b/src/images/favicon/favicon-32x32.png new file mode 100644 index 0000000..550d139 Binary files /dev/null and b/src/images/favicon/favicon-32x32.png differ diff --git a/src/images/favicon/favicon.ico b/src/images/favicon/favicon.ico new file mode 100644 index 0000000..a9a7871 Binary files /dev/null and b/src/images/favicon/favicon.ico differ diff --git a/src/images/favicon/site.webmanifest b/src/images/favicon/site.webmanifest new file mode 100644 index 0000000..45dc8a2 --- /dev/null +++ b/src/images/favicon/site.webmanifest @@ -0,0 +1 @@ +{"name":"","short_name":"","icons":[{"src":"/android-chrome-192x192.png","sizes":"192x192","type":"image/png"},{"src":"/android-chrome-512x512.png","sizes":"512x512","type":"image/png"}],"theme_color":"#ffffff","background_color":"#ffffff","display":"standalone"} \ No newline at end of file diff --git a/images/inspect_changes.png b/src/images/inspect_changes.png similarity index 100% rename from images/inspect_changes.png rename to src/images/inspect_changes.png diff --git a/src/images/logos/logo.jpg b/src/images/logos/logo.jpg new file mode 100644 index 0000000..c5177bc Binary files /dev/null and b/src/images/logos/logo.jpg differ diff --git a/src/images/logos/logo.png b/src/images/logos/logo.png new file mode 100644 index 0000000..f94576e Binary files /dev/null and b/src/images/logos/logo.png differ diff --git a/src/images/logos/logo.svg b/src/images/logos/logo.svg new file mode 100644 index 0000000..4e61509 --- /dev/null +++ b/src/images/logos/logo.svg @@ -0,0 +1,56 @@ + + + diff --git a/images/merge.png b/src/images/merge.png similarity index 100% rename from images/merge.png rename to src/images/merge.png diff --git a/images/run_manually.png b/src/images/run_manually.png similarity index 100% rename from images/run_manually.png rename to src/images/run_manually.png diff --git a/images/view_changes.png b/src/images/view_changes.png similarity index 100% rename from images/view_changes.png rename to src/images/view_changes.png diff --git a/src/index.md b/src/index.md new file mode 100644 index 0000000..42781e5 --- /dev/null +++ b/src/index.md @@ -0,0 +1,57 @@ + + +