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Add Lysis Method to Library Preparation Schema #1419

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willrockout opened this issue Sep 29, 2021 · 0 comments
Open

Add Lysis Method to Library Preparation Schema #1419

willrockout opened this issue Sep 29, 2021 · 0 comments
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content Any PR that incorporates changes to the schema

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@willrockout
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For which schema is a change/update being suggested?

I would like to request an update to the library_preparation_protocol.json schema.

What should the change/update be?

I would like to add a new field - lysis_method - to this schema to allow data contributors to describe the lysis method used for lysing nuclei for snRNA-Nuclei-seq.

This update constitutes a minor change to the schema it affects.

What new field(s) need to be changed/added?

  • Field name: lysis_method
  • Field description: The lysis method used for lysing nuclei for snRNA-seq.
  • Field type: string
  • Required: no
  • Examples: detergent, mechanical
  • CV or enum: no

Why is the change requested?

Data contributors need to be able to describe the different methods used for lysing nuclei from a cell.

@willrockout willrockout added the content Any PR that incorporates changes to the schema label Sep 29, 2021
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