fesom2.1.yml

name: FESOM2 main test

# Controls when the action will run. Triggers the workflow on push or pull request. 

on: [push, pull_request]


# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
  general_test:
    # Containers must run in Linux based operating systems
    runs-on: ubuntu-latest
    # Docker Hub image that `container-job` executes in
    container: ghcr.io/fesom/fesom2_docker:fesom2_test_refactoring-master

    # Service containers to run with `gfortran_ubuntu`
    steps:
    # NK: this changes working directory to fesom2
    - uses: actions/checkout@v2

    - name: Git safe directory
      run: |
        git config --global --add safe.directory ${PWD}

    - name: Compile model (binary)
      run: |
        ./configure.sh ubuntu

    - name: Compile model (ifs_interface)
      run: |
        export BUILD_DIR=$PWD/build.ifs_interface
        ./configure.sh ubuntu -DENABLE_IFS_INTERFACE=ON -DCMAKE_INSTALL_PREFIX=$PWD/install.ifs_interface

    - name: Test downstream from install-dir
      run: |
        export fesom_ROOT=${PWD}
        rm -rf test_downstream/build
        cmake -S test_downstream -B test_downstream/build -DASSERT_HAVE_IFS_INTERFACE=OFF -DASSERT_FESOM_DIR=${fesom_ROOT}
        cmake --build test_downstream/build
        test_downstream/build/main

    - name: Test downstream from ifs_interface build-dir
      run: |
        export fesom_ROOT=$PWD/build.ifs_interface
        rm -rf test_downstream/build
        cmake -S test_downstream -B test_downstream/build -DASSERT_HAVE_IFS_INTERFACE=ON -DASSERT_FESOM_DIR=${fesom_ROOT}
        cmake --build test_downstream/build
        test_downstream/build/main

    - name: Test downstream from ifs_interface install-dir
      run: |
        export fesom_ROOT=$PWD/install.ifs_interface
        rm -rf test_downstream/build
        cmake -S test_downstream -B test_downstream/build -DASSERT_HAVE_IFS_INTERFACE=ON -DASSERT_FESOM_DIR=${fesom_ROOT}
        cmake --build test_downstream/build
        test_downstream/build/main

    - name: Create global test run
      run: |
        mkrun pi test_pi -m docker

    - name: FESOM2 global test run
      run: |    
        cd work_pi
        chmod +x job_docker_new
        ./job_docker_new
    - name: Check global results
      run: |
        cd work_pi
        fcheck .
    - name: Check UGRID Compliance
      run: |
        pip install ugrid-checks xarray
        # Needed to combine the mesh diag and output
        python3 -c "import xarray as xr; ds1 = xr.open_dataset('./test/output_pi/sst.fesom.1948.nc'); ds2 = xr.open_dataset('./test/output_pi/fesom.mesh.diag.nc'); xr.merge([ds1, ds2]).to_netcdf('./test/output_pi/merged_ugrid_check.nc')"
        ugrid-checker ./test/output_pi/merged_ugrid_check.nc

    - name: Check restarts
      run: |
        cd work_pi
        ./job_docker_new

    - name: Create channel test run
      run: |
        mkrun souf test_souf -m docker

    - name: FESOM2 channel test run
      run: |    
        cd work_souf
        chmod +x job_docker_new
        ./job_docker_new

    - name: Check channel  results
      run: |
        cd work_souf
        fcheck .    
        
    - name: Check partitioner compilation
      run: |
        cd mesh_part
        bash -l configure.sh ubuntu

    - name: Run partitioner
      run: |
        cd work_pi
        cp ../bin/fesom_ini.x .
        ./fesom_ini.x