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Subset the SPE object for cell-level visualization #90

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nilseling opened this issue Jan 18, 2024 · 0 comments
Open

Subset the SPE object for cell-level visualization #90

nilseling opened this issue Jan 18, 2024 · 0 comments
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@lassedochreden
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enhancement New feature or request

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@nilseling
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I only remembered now that cytomapper scales across the whole SPE object for area and feature visualization when using plotCells. So it might be better in 11.2 to first subset the SPE object to only contain cells of the displayed images. @lassedochreden, maybe that's something that you could adjust?
@lassedochreden lassedochreden self-assigned this Jan 24, 2024
@SchulzDan SchulzDan added the enhancement New feature or request label Feb 9, 2024
@lassedochreden lassedochreden mentioned this issue Feb 12, 2024
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@nilseling @SchulzDan @lassedochreden