-
Notifications
You must be signed in to change notification settings - Fork 32
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
NetCDF compound types #104
Comments
Can you paste here the output of "ncdump -h file.nc" ? |
The dump is huge (> 3000 lines) , sorry not sure which part to cut.
|
Maybe the netcdf file uses some unimplemented type. Currently, only vlen-arrays as user types are implemented. Can you retry with the updated code from master? It probably still fails, but it will give a more informative error message to know which kind of user type is used. It is probably the compound types that are problematic. Also, can you load the data you are interested in? Or you actually need the data stored in these compound types? |
Installed the master version, but the exact same error message compares when opening the file:
I can load the data, I didn't even think of trying:
It also seems that if it is executed from the command line, the error does not appear: script.jl
result
|
Describe the bug
Hello!
I'm having problems in opening a Sentinel-5P NetCDF4 file downloaded from the https://s5phub.copernicus.eu/dhus/#/home. It is a ~3GB sized file with nested groups i.e:
To Reproduce
file = "home/user/DATA/S5P_OFFL_L1B_RA_BD6_20190813T101520_20190813T115649_09492_01_010000_20190813T134640.nc"
ds = NCDataset(file,"r")
Expected behavior
I tried it with Python and Panoply and it works as it should, hence is not a data formatting issue.
Environment
Full output
The text was updated successfully, but these errors were encountered: