diff --git a/MOM_input b/MOM_input
index 6340eaf..0fa2980 100644
--- a/MOM_input
+++ b/MOM_input
@@ -71,7 +71,7 @@ NJGLOBAL = 1080 !
! domain. With STATIC_MEMORY_ this is set in MOM_memory.h at compile time.
! === module MOM_fixed_initialization ===
-INPUTDIR = "./input/" ! default = "."
+INPUTDIR = "./INPUT/" ! default = "."
! The directory in which input files are found.
! === module MOM_grid_init ===
diff --git a/README.md b/README.md
index 970030d..dade9ee 100644
--- a/README.md
+++ b/README.md
@@ -14,4 +14,4 @@ information.
## Requirements
-This configuration requires payu v1.0.29 or greater to run correctly.
+This configuration requires [Payu](https://github.com/payu-org/payu) > v1.1.3 to run.
diff --git a/datm.streams.xml b/datm.streams.xml
index 039cfb2..8ff9d45 100644
--- a/datm.streams.xml
+++ b/datm.streams.xml
@@ -11,10 +11,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.prsn.1990_1991.nc
+ ./INPUT/RYF.prsn.1990_1991.nc
prsn Faxa_prsn
@@ -32,10 +32,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.prra.1990_1991.nc
+ ./INPUT/RYF.prra.1990_1991.nc
prra Faxa_prrn
@@ -53,10 +53,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.rlds.1990_1991.nc
+ ./INPUT/RYF.rlds.1990_1991.nc
rlds Faxa_lwdn
@@ -75,10 +75,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.rsds.1990_1991.nc
+ ./INPUT/RYF.rsds.1990_1991.nc
rsds Faxa_swdn
@@ -97,10 +97,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.huss.1990_1991.nc
+ ./INPUT/RYF.huss.1990_1991.nc
huss Sa_shum
@@ -119,10 +119,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.psl.1990_1991.nc
+ ./INPUT/RYF.psl.1990_1991.nc
psl Sa_pslv
@@ -141,10 +141,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.tas.1990_1991.nc
+ ./INPUT/RYF.tas.1990_1991.nc
tas Sa_tbot
@@ -163,10 +163,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.uas.1990_1991.nc
+ ./INPUT/RYF.uas.1990_1991.nc
uas Sa_u
@@ -185,10 +185,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.vas.1990_1991.nc
+ ./INPUT/RYF.vas.1990_1991.nc
vas Sa_v
diff --git a/datm_in b/datm_in
index ac6c7e7..82e15da 100644
--- a/datm_in
+++ b/datm_in
@@ -8,8 +8,8 @@
flds_preso3 = .false.
flds_wiso = .false.
iradsw = 1
- model_maskfile = "./input/access-om2-025deg-nomask-ESMFmesh.nc"
- model_meshfile = "./input/access-om2-025deg-nomask-ESMFmesh.nc"
+ model_maskfile = "./INPUT/access-om2-025deg-nomask-ESMFmesh.nc"
+ model_meshfile = "./INPUT/access-om2-025deg-nomask-ESMFmesh.nc"
nx_global = 1440
ny_global = 1080
restfilm = "null"
diff --git a/drof.streams.xml b/drof.streams.xml
index 90c7d9f..74426a8 100644
--- a/drof.streams.xml
+++ b/drof.streams.xml
@@ -11,10 +11,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.friver.1990_1991.nc
+ ./INPUT/RYF.friver.1990_1991.nc
friver Forr_rofl
@@ -32,10 +32,10 @@
1900
1900
null
- ./input/JRA55do-ESMFmesh.nc
+ ./INPUT/JRA55do-ESMFmesh.nc
null
- ./input/RYF.licalvf.1990_1991.nc
+ ./INPUT/RYF.licalvf.1990_1991.nc
licalvf Forr_rofi
diff --git a/drof_in b/drof_in
index f73a5cc..5069506 100644
--- a/drof_in
+++ b/drof_in
@@ -1,7 +1,7 @@
&drof_nml
datamode = "copyall"
- model_maskfile = "./input/access-om2-025deg-nomask-ESMFmesh.nc"
- model_meshfile = "./input/access-om2-025deg-nomask-ESMFmesh.nc"
+ model_maskfile = "./INPUT/access-om2-025deg-nomask-ESMFmesh.nc"
+ model_meshfile = "./INPUT/access-om2-025deg-nomask-ESMFmesh.nc"
nx_global = 1440
ny_global = 1080
restfilm = "null"
diff --git a/ice_in b/ice_in
index e4be77b..013722b 100644
--- a/ice_in
+++ b/ice_in
@@ -17,15 +17,15 @@
print_global = .false.
/
&grid_nml
- bathymetry_file = "./input/topog.nc"
+ bathymetry_file = "./INPUT/topog.nc"
grid_atm = "A"
- grid_file = "./input/grid.nc"
+ grid_file = "./INPUT/grid.nc"
grid_format = "nc"
grid_ice = "B"
grid_ocn = "A"
grid_type = "tripole"
kcatbound = 0
- kmt_file = "./input/kmt.nc"
+ kmt_file = "./INPUT/kmt.nc"
nblyr = 1
ncat = 5
nfsd = 1
diff --git a/manifests/input.yaml b/manifests/input.yaml
index 01e6a52..e15c67f 100644
--- a/manifests/input.yaml
+++ b/manifests/input.yaml
@@ -1,113 +1,113 @@
format: yamanifest
version: 1.0
---
-work/input/JRA55do-ESMFmesh.nc:
+work/INPUT/JRA55do-ESMFmesh.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/share/meshes/share/2024.01.25/JRA55do-ESMFmesh.nc
hashes:
- binhash: 100055c7cbb1d91ae5036ce7ba102fe0
+ binhash: 2e3338c0e60e1a635ddb96a6ddf75500
md5: 1c8481b8c85f59b6cbfc2ed5bc24c77d
-work/input/RYF.friver.1990_1991.nc:
+work/INPUT/RYF.friver.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.friver.1990_1991.nc
hashes:
- binhash: df5b6715e020f563acb65673571a565f
+ binhash: abba207de30541a83d25e24b424cfa87
md5: fa3a55aeb6706a1b422d096f61a772c1
-work/input/RYF.huss.1990_1991.nc:
+work/INPUT/RYF.huss.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.huss.1990_1991.nc
hashes:
- binhash: 71d6099511ebc8b43f9b86b325ecf3af
+ binhash: 1d67d219c6f161051dec204a1842a968
md5: 6032d514fdfdd2b6a84bdef0a4ac3afe
-work/input/RYF.licalvf.1990_1991.nc:
+work/INPUT/RYF.licalvf.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.licalvf.1990_1991.nc
hashes:
- binhash: f219ce98f3fcbe6f8ec517740f01aee1
+ binhash: 834da0a081e904fdbc892255d1954062
md5: 6f927702cbc023cc20d3ddd69695f0a0
-work/input/RYF.prra.1990_1991.nc:
+work/INPUT/RYF.prra.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.prra.1990_1991.nc
hashes:
- binhash: 2754bd49fff02bf5330a086310f1c296
+ binhash: 7bc006b83a9891d4f9ef39f4d94ffb05
md5: ac199086106ec4e41506e6082bccb109
-work/input/RYF.prsn.1990_1991.nc:
+work/INPUT/RYF.prsn.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.prsn.1990_1991.nc
hashes:
- binhash: 154a15cde4940309ac5e6fef0d7faba4
+ binhash: a57a154152a830ad1ca820ca9487d5ac
md5: cd076c877c2c5df61615e04d71ed00e0
-work/input/RYF.psl.1990_1991.nc:
+work/INPUT/RYF.psl.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.psl.1990_1991.nc
hashes:
- binhash: 559b1e3183475cfb94a7f013f4acf8ea
+ binhash: 420c371361bb677eb87c01255c6e62b3
md5: 0dfd94a5c3234fd2016dfdd01e84a170
-work/input/RYF.rhuss.1990_1991.nc:
+work/INPUT/RYF.rhuss.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.rhuss.1990_1991.nc
hashes:
- binhash: 1f70c237032f7368e6f2478d2a678c99
+ binhash: fe4460b8d68f94df26adc52fb56a0d6a
md5: 632519955305cb5c19e286b151439fb5
-work/input/RYF.rlds.1990_1991.nc:
+work/INPUT/RYF.rlds.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.rlds.1990_1991.nc
hashes:
- binhash: 9512836673a68507bed403ecd859ba38
+ binhash: 07a7fb6f9d2a3aee4081034f0cfc305a
md5: 0ea83e107ec883c3f39a12b60ff50d8e
-work/input/RYF.rsds.1990_1991.nc:
+work/INPUT/RYF.rsds.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.rsds.1990_1991.nc
hashes:
- binhash: 7ff7cd79ace33fefe2b9a91ea018ea14
+ binhash: 2d6c41b66024e460fcfe0a1668bfe151
md5: b74bf123f1e4557368a61732cf24f1c2
-work/input/RYF.tas.1990_1991.nc:
+work/INPUT/RYF.tas.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.tas.1990_1991.nc
hashes:
- binhash: 8f3c6798cc92a1d0b6573eb44b2a4dd2
+ binhash: 2a7a2f9903346123161b91ed8d5fab52
md5: 06689885f4f2f726b95a2818ab78a20d
-work/input/RYF.uas.1990_1991.nc:
+work/INPUT/RYF.uas.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.uas.1990_1991.nc
hashes:
- binhash: 54ede2172bf85bc861bc64c296a03f8c
+ binhash: bfd4876aac0b31e51a18c7724c84d8b1
md5: 107bf9480f55597655d2d283b6f6b4ff
-work/input/RYF.vas.1990_1991.nc:
+work/INPUT/RYF.vas.1990_1991.nc:
fullpath: /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data/RYF.vas.1990_1991.nc
hashes:
- binhash: 17224eecb745b6ce72604b41201c1fe7
+ binhash: d15ca562e37e82fb2d31657701f0a560
md5: 88dc8c70338bbc8f5efc48ed0009a99f
-work/input/access-om2-025deg-ESMFmesh.nc:
+work/INPUT/access-om2-025deg-ESMFmesh.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/share/meshes/global.025deg/2024.03.26/access-om2-025deg-ESMFmesh.nc
hashes:
- binhash: a0f24b799b0ed45ca52b673551e359e7
+ binhash: 31b003c141116da81eb9578b30a0b61d
md5: c006851eea2a64e881c41f3e9426e4ac
-work/input/access-om2-025deg-nomask-ESMFmesh.nc:
+work/INPUT/access-om2-025deg-nomask-ESMFmesh.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/share/meshes/global.025deg/2024.03.26/access-om2-025deg-nomask-ESMFmesh.nc
hashes:
- binhash: 29f147c299de419f5a32d129491a8ea2
+ binhash: e221216e03543adc8234cbef35623765
md5: db5407804d759435c6846d2d2c661a6e
-work/input/grid.nc:
+work/INPUT/grid.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.025deg/2024.05.14/grid.nc
hashes:
- binhash: 352d9abb56c3c8fefcd3748bb69fafdc
+ binhash: b686ead94aef2b112507b46a7371c53c
md5: c859e1e759f33ab39527c7b30a7dbd88
-work/input/kmt.nc:
+work/INPUT/kmt.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.025deg/2024.05.14/kmt.nc
hashes:
- binhash: 2e46b34c831a515bd2589fd1c2d21276
+ binhash: 324268d93c1f55d3a5853a5776dc7bda
md5: 3b9b6269b24a33de75cef4e36fc35376
-work/input/ocean_hgrid.nc:
+work/INPUT/ocean_hgrid.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.025deg/2020.05.30/ocean_hgrid.nc
hashes:
- binhash: 44e77b800b4c68fa445a8bcb40a17fa8
+ binhash: eafca7e3811480417aed0f4e78b3ec02
md5: 38b6f324ae16cc13c180699123ad85b5
-work/input/ocean_temp_salt.res.nc:
+work/INPUT/ocean_temp_salt.res.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/initial_conditions/global.025deg/2020.10.22/ocean_temp_salt.res.nc
hashes:
- binhash: aa38803fb03c4db72205fae72aba0986
+ binhash: 0879960bbd92d63f8c669e74275ff2b4
md5: 1797b25e6339595a320076080145fd5a
-work/input/ocean_vgrid.nc:
+work/INPUT/ocean_vgrid.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/grids/vertical/global.025deg/2024.04.04/ocean_vgrid.nc
hashes:
- binhash: 4417877e69c96b9adc9d17cdbb03ecf3
+ binhash: b803b6d31a6207a88e7c987879daf069
md5: b74672f3e1e4d6f9f3915dd3bf1b0795
-work/input/salt_sfc_restore.nc:
+work/INPUT/salt_sfc_restore.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/surface_salt_restoring/global.025deg/2020.05.30/salt_sfc_restore.nc
hashes:
- binhash: 30f40ec50ded9c51ec36bd98ca9cc304
+ binhash: 9062cd8b7396da7bce54bfb2726f7806
md5: 434b4bdb323d17e9714d02519627fea2
-work/input/topog.nc:
+work/INPUT/topog.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om3/share/grids/global.025deg/2023.05.15/topog.nc
hashes:
- binhash: a28737be8c7c628ea7be82363f26125b
+ binhash: c596006f0bbc89dbefd038c24347ec4e
md5: fa71dfdf4a91198d651d657bcf9aadb6
diff --git a/nuopc.runconfig b/nuopc.runconfig
index a4d1916..3fdf423 100644
--- a/nuopc.runconfig
+++ b/nuopc.runconfig
@@ -116,12 +116,12 @@ ALLCOMP_attributes::
hostname = gadi
ice_ncat = 5
mediator_present = true
- mesh_atm = ./input/access-om2-025deg-nomask-ESMFmesh.nc
+ mesh_atm = ./INPUT/access-om2-025deg-nomask-ESMFmesh.nc
mesh_glc = UNSET
- mesh_ice = ./input/access-om2-025deg-ESMFmesh.nc
+ mesh_ice = ./INPUT/access-om2-025deg-ESMFmesh.nc
mesh_lnd = UNSET
- mesh_mask = ./input/access-om2-025deg-ESMFmesh.nc
- mesh_ocn = ./input/access-om2-025deg-ESMFmesh.nc
+ mesh_mask = ./INPUT/access-om2-025deg-ESMFmesh.nc
+ mesh_ocn = ./INPUT/access-om2-025deg-ESMFmesh.nc
model_version = unknown
ocn2glc_coupling = .false.
ocn2glc_levels = 1:10:19:26:30:33:35
@@ -329,7 +329,7 @@ OCN_attributes::
ROF_attributes::
Verbosity = off
- mesh_rof = ./input/access-om2-025deg-nomask-ESMFmesh.nc
+ mesh_rof = ./INPUT/access-om2-025deg-nomask-ESMFmesh.nc
::
WAV_attributes::
@@ -382,7 +382,7 @@ OCN_modelio::
pio_rearranger = 2 #not used
pio_root = 1 #not used
pio_stride = 48 #not used
- pio_typename = netcdf #not used, set in input.nml
+ pio_typename = netcdf #not used, set in INPUT.nml
::
ROF_modelio::